Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02825 ATGCTCTTGCTCTTCTCTCTCCCCATCTCTCTCTTGTGGCTCAACCTCGAACCCTTCATGCTCTGCCTTCACCAGAACCCCAACATAACACGTGTCGCAAGCATATATTGCCGCTTCGCCATCCCTGACCTCCTTGCCAACAGCCTCCTCCACCCTCTTCGCATTTACCTCCGTAGCAAAGGGACAACATGGCCATTAATGTGGTGCACCTTACTTGCTATTCTCCTCCACGTTCCCATCATCATTCTTTTGACCTTCAAGCTTCACCTTGGCGTCGCCGGAATCGCCATATCATCCTTCCTTGCCAACTTCAACACTCTCTTCTTCCTCCTTCTCTACATGTACTACACCTCTGTCTCCCAAGAATTATCTCTAGCCCTGCCACTGATTAAGGGAGCACACCATGTTGGAGACGCCACGCTTAACTTCATCAAGGAATGGGCCATGCTACTCAAGTTCTCCATACAGAGTTGTCTCGCTGTGTGCTTGGAATGGTGGTGGTACGAATTCATGACAATCATGGCAGGCTACCTTTACAACCCTCGTGCATCGCTCGCCACCGCCGGCATAGTGATACAAACGACATCTCTTTTGTACACTCTGCCGACGGCGCTCAGCGCGTCTGCATCCACGAGGGTTGGCAACAAACTCGGAGCAGGGCAACCCGAAAGGGCGAGCTTGTCGACAGTGGTAGCCATAGGGCTATCACTGACAAGCTCGATCTTGGGGTTGCTCTGGACCACAGTAGGGAGAGAGAGATGGAGCAGAGTGTTCACGGATGATAGGGAGGTTGTGGAGCTAACAATGGTTGTGTTGCCGATAATCGGAGTGTGTGAGCTGGCAAACTGTCCGCAAACGACTTGTTGCGGAATATTGAGAGGGAGTGCAAGACCGGGTGTGGGAGCAGCCATAAACTTCTGCTCGTTTTACATGGTGGGAGCACCGGTGGCGATAGTATTGGCGTTCGTATTGGGAATGGGAATGGTGGGTTTGTGTTATGGGCTTCTAGCAGCGCAAATGGCGTGTGTGGTTTCGATTCTTGTTGTGGTTTATAAAACAGATTGGGAGAGTGAGTCTTTGAAAGCCAAAATCTTGGTCGGAAAGAGTCACAGCTTGTTATCATCACGTGCAGAAGAAGAAGAGGATCAAACACTCAAATGTGAAGAAGGTGTTGTCTTTCTCAACCCCCAATAA 1194 0.5042 MLLLFSLPISLLWLNLEPFMLCLHQNPNITRVASIYCRFAIPDLLANSLLHPLRIYLRSKGTTWPLMWCTLLAILLHVPIIILLTFKLHLGVAGIAISSFLANFNTLFFLLLYMYYTSVSQELSLALPLIKGAHHVGDATLNFIKEWAMLLKFSIQSCLAVCLEWWWYEFMTIMAGYLYNPRASLATAGIVIQTTSLLYTLPTALSASASTRVGNKLGAGQPERASLSTVVAIGLSLTSSILGLLWTTVGRERWSRVFTDDREVVELTMVVLPIIGVCELANCPQTTCCGILRGSARPGVGAAINFCSFYMVGAPVAIVLAFVLGMGMVGLCYGLLAAQMACVVSILVVVYKTDWESESLKAKILVGKSHSLLSSRAEEEEDQTLKCEEGVVFLNPQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02825 397 PANTHER PROTEIN DETOXIFICATION 55 1 371 - -
Aip01g02825 397 CDD MATE_eukaryotic 2 361 IPR045069 GO:0042910|GO:1990961
Aip01g02825 397 Pfam MatE 157 318 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip01g02825 397 Pfam MatE 2 81 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip01g02825 397 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02825 Aip-Chr1 130033767 130035371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02825 K03327 - gmx:100785533 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02825 01 130033767 130035371 Aip01g02825 01 130033767 130035371 ECH
Aip01g02825 01 130033767 130035371 Aip04g01123 04 17074289 17077137 PCT