Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01087 ATGGCGGCGGGGACGATGGCGACGGCAGCCGGAGCGGCGGTGATGCTGTACTATGTCCTCAGCCGGAGGCTAGGGCGGAAGGATTCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCGACGGCGGCGGCGATCCGTCGAAGTCAGGTAGATCGGTTCGCCGGAGGAGGATCTCACGGCGGCCAGCTCAGCCTCCGGCGACGCTGCTCGAATCGATCGTGACGCTGTCGGAGACGCTGAGGTTCACTTACTCCGAGACGCTCGGCAAATGGCCAATCGGCGACTTGGCCTTCGGCATCAACTACTTCATGCGCAAGCAGGGTAATTTGCCAGTGGCTAGTGTTTATGCTGGGAGTGAGTGTGTGCAACTGAAAGGGGATGATATCATTGTGGAGCTTTATGAGCTGTTGCGGTTGTTGACACTTTGCATGCTTTTCTCTAAGAAGCCATTTCCTGTGTTCTTAGATTCTGCTGGATTCTCCCCTGATGATGTGCTCATACAGATGCCCAAAGCTGGGCTTTTGAGGCCTGCTTTTACAATTATACGAGATACACAGTCAAAATGCTTACTTCTATTGATACGGGGCACTCATAGCATAAAAGACACGCTGACAGCTGCAACCGGTGCTGTGGTCCCATTCCACCATTCTGTTTTAAATGATGGCGGGATAAGCAACTTAGTTTTAGGATATGCACACTGCGGTATGGTTGCTGCTGCTCGTTGGATTGCAAAGCTCTGCACTCCTACCCTACTCAAGGCTCTTGGTGAAAGTCCAGACTTCAAAGTCAAGATTGTTGGACACTCTCTTGGGGGTGGTACTGCTGCACTGTTAACGTATATTCTTAGAGAACAGAAGGAGTTCTCTACAAGCACTTGTGTCACGTTTGCTCCAGCTGCCTGTATGACATGGGAGTTAGCAGAATCAGGAAAGAACTTCATCACTACTATCATCAATGGTTCTGATTTAGTGCCCACGTTCTCGACTGCATCTATTGATGATCTCCGTTCTGAGGTCACCGCGTCCTCATGGATAAATGATTTACGGGATCAGGTTGAACATACAAGGGTCCTGAATGTTGTCTACCGCTCTGCAACTGCACTTGGATCTCACTTACCGTCTATATCTAGCGCAAAGGCGCGGGTAGCTGGGGCAGGCGCAATTCTGTGGCCAGTAACCAGCGGCACTCAGGTTGTGATGAAGCGGGCACAAAGTGTTGCTGAAGCTGTAGTCAGAACTCGTTCATCATTATCATCATGGTCTTGCATGAGTGCGCGTCGCCGGAATGTTAGTTCATCTCCCAACAGCAAAACAGAAGACTTAAGCGAAGCGTCTCTGATATCCGAAACAGCTACTGAATCTCTTTTGACCGAAGAGATGGTAACAGAATCAACCCTTAAGGATGAACACAGTTCCTCATCAAGTGGAGGATCCGGCCACGATGATACGGATGAAGAGGAACAACTACTTGCTGCCAAACAAGACATTTCTGATTCCACTGCAGATCACATAACAGAAGGCCAGTTGTGGTATGAACTAGAGAAGGAGCTTCAGAAACAGGAGAATTCCATCGACATTGATGTTCAGGAAGAAGAGGCCGCGGCAGCGAAAGAGATAACTGAGGAAGAGAATCAGCTTGTTGATGCTGCGGAAGGAAGCAATTCGATCACAACATCTGAAAATGTTGATAGCCACCGGTTTTATCCCCCGGGGAGGATCATGCACATTGTCTGCATGCCTTCCCCGGTTGAATCAAATTCCGATGATCCTGTCGAGGAACATGTGGGCTTATTCGAAACACCTAGAGAGCTTTACAGCAAGCTTAGACTTTCAAGAACGATGATAAATGATCATTATATGCCAATGTATAAGAAGATGATGGAACTATTAATTCGAGAATTAGAGAAAGATACCACTGGTGACGTTATAATGTGA 2007 0.4609 MAAGTMATAAGAAVMLYYVLSRRLGRKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGGGDPSKSGRSVRRRRISRRPAQPPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLPVASVYAGSECVQLKGDDIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSPDDVLIQMPKAGLLRPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGESPDFKVKIVGHSLGGGTAALLTYILREQKEFSTSTCVTFAPAACMTWELAESGKNFITTIINGSDLVPTFSTASIDDLRSEVTASSWINDLRDQVEHTRVLNVVYRSATALGSHLPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVSSSPNSKTEDLSEASLISETATESLLTEEMVTESTLKDEHSSSSSGGSGHDDTDEEEQLLAAKQDISDSTADHITEGQLWYELEKELQKQENSIDIDVQEEEAAAAKEITEEENQLVDAAEGSNSITTSENVDSHRFYPPGRIMHIVCMPSPVESNSDDPVEEHVGLFETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDTTGDVIM 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01087 668 Pfam Lipase 3 N-terminal region 81 148 IPR005592 GO:0016042
Aip04g01087 668 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 65 662 - -
Aip04g01087 668 MobiDBLite consensus disorder prediction 452 522 - -
Aip04g01087 668 Gene3D alpha/beta hydrolase 183 390 IPR029058 -
Aip04g01087 668 MobiDBLite consensus disorder prediction 58 82 - -
Aip04g01087 668 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 30 - -
Aip04g01087 668 MobiDBLite consensus disorder prediction 452 502 - -
Aip04g01087 668 CDD Lipase_3 172 358 - -
Aip04g01087 668 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 65 662 - -
Aip04g01087 668 SUPERFAMILY alpha/beta-Hydrolases 176 353 IPR029058 -
Aip04g01087 668 Pfam Lipase (class 3) 216 353 IPR002921 GO:0006629
Aip04g01087 668 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01087 Aip-Chr4 16276859 16281291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g01087 1 662 Acyl Lipid Metabolism Gene Families AT4G16070 63.256 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01087 - - gmx:100782138 1000.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01087 04 16276859 16281291 Aip04g01087 04 16276859 16281291 ECH
Aip01g02853 01 130410445 130416412 Aip04g01087 04 16276859 16281291 PCT