Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02853 ATGCTTTCGACGCCTTTGGAAAAGAGAAAGGGGAATAATAATAAGATAATAAAGGAAGGAAAAGTTTTGCACTTTGAGCCTTCATATTTTGAACGTATTTGGGAATTGGGACTCGCCAATGTGGCTTCTCCAATCGCCATTCCCAGCTGGAAGCTCCTTTCTAGAAAGGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGCATGGATTCGTCGAGACTGAGCAGAACGGTGAGGAGGAGGTTTGCTCGGAGGCCAGCTCAGGCGCCGGCGAATCTCTTGGAGTCGATCGTGACGCTCTCGGAGACTTTGAGGTTCACGTACTCGGAGACTCTCGGAAAGTGGCCCATCGGAGACTTGGCGTTCGGCATCAACTACTTCATGCGCAAGCAGGGTAATGTAGTAGTCGCGAGTGTATACGGAGGGAGTGGTTGTGTGGAATTGAAAGGGCGTGAGATAGTTGGGGAGCTGCGTGAGCTGTTGAGGTTGCTGACAATGTGCATGCTCTTCTCAAAGAAGCCGTTTCCGGTGTTCTTAGATTCCGCCGGATTCTCCCCGGAGCATGTTCTCCTTCAGAAGCCCAAAGCTGGGCTTCTGAAGCCTGCTTTCACAATTATACGGGATACACAATCAAAATGTTTTCTTCTATTGATCCGGGGAACTCATAGCATAAAAGATACTCTAACAGCTGCAATGGGTGCTGTCGTCCCTTTCCACCACTCTGTTTTAAATGATGGTGGGGTGAGCAACTTGGTTTTAGGATATGCACACTGTGGTATGGTGGCTGCAGCTCGTTGGATTGCAAAGCTCTGCACTCCGACATTGCATAAGGCTCTTGGTGAATGTGCTGACTTTAAAGTCAAGATTGTTGGGCACTCACTTGGTGGTGGTACTGCTGCACTGTTAACTTATATTCTTAGAGAACAAAAAGAGTTCTCTTCAAGCACATGCGTCACATTTGCCCCAGCTGCCTGTATGACATGGGAATTAGCTGAATCAGGGAAGCACTTTATCACCACTGTTATAAATGGTTCAGATCTAGTGCCTACGTTCTCAACTTCCTCTGTCGATGATCTTCGTTCTGAGGTCACAGCATCATCATGGTTGAATGATTTACGAGATCAAGTTGAGCATACAAAGGTCCTGAATGTTGTCTACCGCTCTGCAACTGCACTTGGATCCCGGTTGCCATCTATATCTAGCGCTAAAGCAAGAGTAGCTGATGCAGGAGCGCTTTTGAAGCCAGTAACCAGTAGCACCCAGGTTGTTGTGATGAAGCGTGCACAAAGTGTTGCTGAAGCTGTAGTCAGAACTCGCTCATCATTGTCATCATGGTCCTGCATGAGTGCACGTCGTCGGAGTGTTGGCCCACTACCAAACTCCAAACTGGAGAACTCAGCAGAAACTTCTGTAGTAGCCAAGAGAACTGCGGAATCTCTTTTTACTGAAGAGGTAGTTAGAGATCATATGCTTAGTAATGATGAACCTAGTTCATCAAGTGGAGGATCTGTCCACGATGACACGGATGAAGAGGAAAAACTCCTCCCTGCTAATCAGTACGTTACCACTTCCACTGTGGATGGCATCACTGAAGGCGAATTATGGTCCCAACTGGAGCAGGAGCTCCAGCAGAAGGACAATATCACCGAGATTCAGGCTCGGGAAGAAGAGGCAGCCGCAGCAAAAGAAATAATCGAAGAAGAGAATCAGTTTGTTGATGCAGCAGAAAGCAGTAATTCGATCACATCCGACAACTTGGATAACCAACGATTTTATCCCCCAGGAAGAATCATGCATATTGTCCCTGTACCTTCATCTGGTGATTCTAATTCAAATTCCAATGGACCCGTTGAGGAGCGGGTCTGCTTATATGAAACACCCAGAGAGCTATATAGCAAGCTCAGGCTTTCAAAAACGATGATAAATGATCATTACATGCCCATGTATAAGAGGATGATGGAACTACTAATTCGAGAACTAGAGAAAGATAGTAGCTTTGACGTGATAATGTGA 2016 0.4653 MLSTPLEKRKGNNNKIIKEGKVLHFEPSYFERIWELGLANVASPIAIPSWKLLSRKEEEEEEGGGGGGGMDSSRLSRTVRRRFARRPAQAPANLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNVVVASVYGGSGCVELKGREIVGELRELLRLLTMCMLFSKKPFPVFLDSAGFSPEHVLLQKPKAGLLKPAFTIIRDTQSKCFLLLIRGTHSIKDTLTAAMGAVVPFHHSVLNDGGVSNLVLGYAHCGMVAAARWIAKLCTPTLHKALGECADFKVKIVGHSLGGGTAALLTYILREQKEFSSSTCVTFAPAACMTWELAESGKHFITTVINGSDLVPTFSTSSVDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVADAGALLKPVTSSTQVVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRSVGPLPNSKLENSAETSVVAKRTAESLFTEEVVRDHMLSNDEPSSSSGGSVHDDTDEEEKLLPANQYVTTSTVDGITEGELWSQLEQELQQKDNITEIQAREEEAAAAKEIIEEENQFVDAAESSNSITSDNLDNQRFYPPGRIMHIVPVPSSGDSNSNSNGPVEERVCLYETPRELYSKLRLSKTMINDHYMPMYKRMMELLIRELEKDSSFDVIM 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02853 671 CDD Lipase_3 173 359 - -
Aip01g02853 671 Gene3D alpha/beta hydrolase 183 389 IPR029058 -
Aip01g02853 671 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 52 665 - -
Aip01g02853 671 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 52 665 - -
Aip01g02853 671 Pfam Lipase 3 N-terminal region 82 144 IPR005592 GO:0016042
Aip01g02853 671 MobiDBLite consensus disorder prediction 489 516 - -
Aip01g02853 671 Coils Coil 549 569 - -
Aip01g02853 671 Pfam Lipase (class 3) 217 354 IPR002921 GO:0006629
Aip01g02853 671 SUPERFAMILY alpha/beta-Hydrolases 179 355 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02853 Aip-Chr1 130410445 130416412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02853 87 665 Acyl Lipid Metabolism Gene Families AT4G16070 65.410 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02853 - - aip:107638829 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02853 01 130410445 130416412 Aip01g02853 01 130410445 130416412 ECH
Aip01g02853 01 130410445 130416412 Aip04g01087 04 16276859 16281291 PCT