Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00986 ATGGCTAAAACTCTTCACATTACTTTTACCATTACCATCATTCTCCTCTTTTCTTCTTCTTCTATTCCCTGCACACAATCCCAAACCACCAGAGTGTACTACTATTGGAATGAGAACAATGGTGTTGAAGATCTAATAGAGCAAGTATGCAAAAGAACACCCTTTTATGACTTATGCATTTCCACACTCCACAACAACCCTCTTCTAAGCCCCAAGAGTGACATCAAACAAGTAGCACTCATAATGGTCAACAACATTCTGTCAAATGCAACTGACACACTCAATTACATTGAAGCCCTTTTGAAGCACACAAAGGACCCCCAATTGGAACAAGCTTTGGCTCTTTGTGCTGAGTCATATATCCCTGTTGTGAGGTTCACTCTTCCACAAGCAGCTGTGGCTATAAGCCAGGGACACTTTGCCTTTGCAAGTTACTGCATTTCTGATGCTGTTAAGGAAGTTAATTCCTGTGAGGGTAGATTGGTGAAATCACCTTCTGATAAGTCACCTTTGGGTGATAGGAATGATGTTGTTCAGAAGCTTGTTGATGTTGCTAATGCCATTATCAAATTGCTTTTGAAGGCTTGA 588 0.4082 MAKTLHITFTITIILLFSSSSIPCTQSQTTRVYYYWNENNGVEDLIEQVCKRTPFYDLCISTLHNNPLLSPKSDIKQVALIMVNNILSNATDTLNYIEALLKHTKDPQLEQALALCAESYIPVVRFTLPQAAVAISQGHFAFASYCISDAVKEVNSCEGRLVKSPSDKSPLGDRNDVVQKLVDVANAIIKLLLKA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00986 195 SMART PMEI_2 41 188 IPR006501 GO:0004857
Aip04g00986 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Aip04g00986 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 193 IPR035513 -
Aip04g00986 195 CDD CIF_like 43 192 IPR034087 GO:0004857|GO:0043086
Aip04g00986 195 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 38 194 - -
Aip04g00986 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 38 194 - -
Aip04g00986 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 192 IPR035513 -
Aip04g00986 195 Pfam Plant invertase/pectin methylesterase inhibitor 44 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00986 Aip-Chr4 13865703 13866378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00986 - - gmx:100527840 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00986 04 13865703 13866378 Aip04g00986 04 13865703 13866378 ECH
Aip01g02930 01 131378009 131378521 Aip04g00986 04 13865703 13866378 PCT
Aip04g00986 04 13865703 13866378 Aip01g02939 01 131587611 131588129 PCT