Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02930 ATGAGGAATAAGGTCTCAACCCCTTTAAAACTTGTTCTTCTCTCTTTGACTCTTCTATCCACAACATATTCGGATGATTTGATAGACCAAACATGCAAGAAGACACCATACTATGAACTCTGTAGCAATGTCATCCATTCAAACCCTGCCACCCCAAGTGATCCAAAGGGTATGGTTGTGATAATGATCAACTACGCTCTAGCAAATGCAACTGACACTCTCAAATACATTGGAGACCTTATTAATAAAGTCTCTGACCATGAATTGCAGAACAAATTGGCCTTTTGTGCTGGTCAGTCATATATGCCTGTTGTTAAGTATGTTCTTCATGAAGCTGTTGATTCTATAAACCAAGGCGACTTTGACCTTGCAAGTCACTATATTTCTAATGCTGAGAAAAACATTGTTGCTTGCAACAAGAAATTCACTGGGAATCAGTCACCTTTGAGTTCTAGGAATGGGATTATGCTGCAGCTTCTTGATATTTCTGCTGCAATTCTTAAGAATTTGTAA 513 0.384 MRNKVSTPLKLVLLSLTLLSTTYSDDLIDQTCKKTPYYELCSNVIHSNPATPSDPKGMVVIMINYALANATDTLKYIGDLINKVSDHELQNKLAFCAGQSYMPVVKYVLHEAVDSINQGDFDLASHYISNAEKNIVACNKKFTGNQSPLSSRNGIMLQLLDISAAILKNL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02930 170 CDD CIF_like 25 170 IPR034087 GO:0004857|GO:0043086
Aip01g02930 170 Pfam Plant invertase/pectin methylesterase inhibitor 26 166 IPR006501 GO:0004857
Aip01g02930 170 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 170 - -
Aip01g02930 170 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 170 - -
Aip01g02930 170 SMART PMEI_2 23 166 IPR006501 GO:0004857
Aip01g02930 170 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 170 IPR006501 GO:0004857
Aip01g02930 170 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 170 IPR035513 -
Aip01g02930 170 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 170 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02930 Aip-Chr1 131378009 131378521 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02930 - - gmx:100820305 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02930 01 131378009 131378521 Aip04g00986 04 13865703 13866378 PCT