Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g00343 ATGGCACTTAAAGTTCCAGCTAATAAAGCTGCTGAGATTGCAATTGGGTCCATTGGCCGTGGTTATGATATATCTACTGATCTAAGGCTCAAGTATTGCAAAGGAGATTCCATAAATTCACGTTTAATTGAGATCGATGAACTTGATGTGAGAGAGGTGGTTTTACCGGGTGGAGTTTCAATTCCAAATGTTTCCACATCTATAAAATGTGATAAAGGGGAACGCACTAGATTCAGGTCTGATGTTCTGTCCTTTCAACAGATGTCAGAGCAGTTCAATCGGGAATTATCTTTGACTGGTAAAATTCCGTCAGGCCTTTTCAATGCTATGTTTGAATTTTCTGGGAGTTGGCAGAAAGATGCAGCCCATACCAAAACCCTTGCTTTTGACGGGGTGTTAATCACACTTTACACTGTTGCATTAGAGAAGTCTCAGTTAGTACTCTGTGATCATGTTAAAAAGGCTGTACCACCATATTGGGACCCACCTGAATTAGCAAGATTTATTGAGACCTTTGGTACCCATATTGTTGTTGGAATGAAAATGGGAGGAAAGGATGTAATATATTTGAAGCAGCAGCACTCATCAGCTCTCCAACCTGCTGATGTTCAAAAAAGACTGAAAGAGATGGCAGATAGGAGATTTATGGATGCTACTGGCCAATATACAATTGCTTCAGATCAAGTTTTCCCAAATGAAAAGGTTTTAACATTCGCTAATATGAGTCCATCAAGTTCTTATTCGCATAAGGAGGACATAATATTCACTTGCAAGAGGAGGGGTGGAAGTGATAACAGAAGCCTACCCCACAACGAGTGGTTACAGACTGTTCAGTTAGAGCCTGATGTTATCTCAATGTCCTTCATTCCAATCACATCTCTCTTGAATGGAGTTCCAGGGAGCGGATTCTTGAGCCATGCCATAAATCTTTATTTAAGATATAAACCACCAATTGAAGAGCTTCACCAGTTCTTGGAATTCCAGTTGCCAAGGCAGTGGGCTCCTGTATTCAGCGAACTTCCTCTTGGTCCACAACGTAAACAACGGAGTTTTTCCTCTTTACAGTTTAGCTTCATGGGGCCAAAGCTATATGTGAACACATCACAGGTTGACGTAGGTAACAGACCAGTGACTGGTCTTCGTCTTTATCTTGAAGGTAAAAAGAGTAATCGTCTGGCAATCCATTTACAACACCTTACATCTCTTCCAAAAGTATTTCAGCTCGAAGATGATCCAAATGGCAACTTTCGGCGCGAGTCCTATGATAAGAGATTCTATGAGAAAGTTCAGTGGAAGAATTTCTCTCATGTGTGCACTTCTCCTGTGGAACCAGAGGATGAAGTTTCCATAGTAACCGGAGCACAACTCCAAGTTGAGAATTATGGCATAAAAAATATACTCTTTCTGAGACTTCGATTCGCAACCGTACTAGGAGTTAAAGAAGTAAAGCATCCCGAGTGGGATGGATCTCCTGGACTGGGAGCCAAGTCTGGACTGATATCTACTCTCATTAGTCAGCATTTCACAGCAACATTTCAGAAGCCACCTCCACGACCCGCAGATGTTAACATAAATTCTGCTGTTTATCCGGGTGGTCCTCCTGTTCCTGTTCAAGCTCCCAAGCTTCTCAAATTTGTCGACACAACCGAGATGACCAGAGGGCCACAGGAAACTCCAGGCTATTGGGTTGTGTCTGGAGCTAGACTTGCTGTTGAGAAGGGCAGGATCTCTCTGAGAGTTAGGTATTCTTTGTTAACTATATCGTTACCGGATGAAGAAATGTTGGATGATCAGTAG 1797 0.4224 MALKVPANKAAEIAIGSIGRGYDISTDLRLKYCKGDSINSRLIEIDELDVREVVLPGGVSIPNVSTSIKCDKGERTRFRSDVLSFQQMSEQFNRELSLTGKIPSGLFNAMFEFSGSWQKDAAHTKTLAFDGVLITLYTVALEKSQLVLCDHVKKAVPPYWDPPELARFIETFGTHIVVGMKMGGKDVIYLKQQHSSALQPADVQKRLKEMADRRFMDATGQYTIASDQVFPNEKVLTFANMSPSSSYSHKEDIIFTCKRRGGSDNRSLPHNEWLQTVQLEPDVISMSFIPITSLLNGVPGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFSELPLGPQRKQRSFSSLQFSFMGPKLYVNTSQVDVGNRPVTGLRLYLEGKKSNRLAIHLQHLTSLPKVFQLEDDPNGNFRRESYDKRFYEKVQWKNFSHVCTSPVEPEDEVSIVTGAQLQVENYGIKNILFLRLRFATVLGVKEVKHPEWDGSPGLGAKSGLISTLISQHFTATFQKPPPRPADVNINSAVYPGGPPVPVQAPKLLKFVDTTEMTRGPQETPGYWVVSGARLAVEKGRISLRVRYSLLTISLPDEEMLDDQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g00343 598 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 1 593 IPR044663 GO:0006952|GO:0012501|GO:2000031
Aip04g00343 598 SMART MACPF_8 124 313 IPR020864 -
Aip04g00343 598 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 325 IPR020864 -
Aip04g00343 598 PANTHER MEMBRANE ATTACK COMPLEX COMPONENT/PERFORIN (MACPF) DOMAIN-CONTAINING PROTEIN-RELATED 1 593 - -
Aip04g00343 598 Pfam MAC/Perforin domain 106 311 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g00343 Aip-Chr4 4222276 4227530 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g00343 - - lang:109345704 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00343 04 4222276 4227530 Aip03g04982 03 134500192 134504476 PCT