Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04982 ATGGCTGTTGGTGGTCAAGATGTAATCTGTGTCAAACAGAAGCATTCTTCAAAGATTTCTCCTGGTGATCTCAGAAGACATTTAGAAGATCTTGGAGATTTTCTGTTTTCAGATGTAAGGAGTCCTTCTTTACTACAGAGGCAGACAGCCGATGGCAAACAGAAGGTCCCTGAGGTCTTTAATCGTGTGATGCAATCAAACACAATGCAGTTCACTACTATTTCAGAAACATCAAGCAAAGATGGCCTCACTATTATTTGCTCCAAAAGAGGAGGAGATATGTTCAAGAACAGTCACTCAAATTGGCTCCAGACAGTGCCTTCTAATCCTGAAGCAATCCTCTTCAAATTCGTTCCTATTTCATCACTTCTAACTGGGATTCCTGGAAGTGGCTATCTTAGCCATGCAATCAACTTGTATTTACGTTACAAGCCTCCTCTTGAAGATATACAATATTTCTTAGAGTTTCAAATTCCCAAGCAATGGGCGCCAATGTTTTGTGAGCTGCCTCTCAGGCATCAGCGGACGAAGACGTCATCCTGTTCCCTGCAATTTAGTTTCATGGGACCAAAGCTCCATATCAGCTCTACACAGGTGGTAACTGAACAAAAACCTGTGGTTGGTCTCCGCTTGTACTTGGAAGGCCGGAAATGTGATAGACTCGCATTACATGTACAACATCTTTCGAGCCTTCCAAATACCATGGTTCTTTCTTCTGGCACCTCAACCCTGCAAACCGCATCTATGTGGCGAGGGTCCGATGACCATGAATCCAGCAACCAATTTCTGGAACCAGTCAGATGGAAGAGATTCTCAAAGGTGTGCACATCAGTAGTTAAGCATGACCCGAATTGGTTGAATGGCTCGAGTGGTGTTTATATTGTAACTGGGGCACAAATCCTTAGTAAAGGAAGTTGGCCAAGGAATGTGCTTCATCTGCGTCTTCTCTTCACGCATATACCTAATTGCAGTATCCGGAAGTCAGAGTGGGCTGGCGCACCAGAGGGTTCAAGAAAGTTCTCTTTCTTCACAAATTTGAGCACAACATTTTCATTCACTCAACAGAGCAACACTGCTCCACGGAAGCAGGCTCCAGCAGCGCTAAACTCCGGTATTTATCCAGAGGGTCCACCTGTGCCGGTTCGCTCAGGTAAACTGCTTAAATATGTGGAGACAGCTGAGGTTGTGCGAGGGCCACATGATGCTCCGGGTCATTGGTTAGTAACTGCTGCCAAGCTCGTGACGGACGGCGGTAAGATTGGAATACAAGTGAAGTTTGCATTGTTAGATTACTGCTGA 1299 0.4511 MAVGGQDVICVKQKHSSKISPGDLRRHLEDLGDFLFSDVRSPSLLQRQTADGKQKVPEVFNRVMQSNTMQFTTISETSSKDGLTIICSKRGGDMFKNSHSNWLQTVPSNPEAILFKFVPISSLLTGIPGSGYLSHAINLYLRYKPPLEDIQYFLEFQIPKQWAPMFCELPLRHQRTKTSSCSLQFSFMGPKLHISSTQVVTEQKPVVGLRLYLEGRKCDRLALHVQHLSSLPNTMVLSSGTSTLQTASMWRGSDDHESSNQFLEPVRWKRFSKVCTSVVKHDPNWLNGSSGVYIVTGAQILSKGSWPRNVLHLRLLFTHIPNCSIRKSEWAGAPEGSRKFSFFTNLSTTFSFTQQSNTAPRKQAPAALNSGIYPEGPPVPVRSGKLLKYVETAEVVRGPHDAPGHWLVTAAKLVTDGGKIGIQVKFALLDYC 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04982 432 PANTHER OS02G0475300 PROTEIN 1 431 - -
Aip03g04982 432 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 154 IPR020864 -
Aip03g04982 432 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 1 431 IPR044663 GO:0006952|GO:0012501|GO:2000031
Aip03g04982 432 Pfam MAC/Perforin domain 57 140 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04982 Aip-Chr3 134500192 134504476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04982 - - gmx:100787945 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g00343 04 4222276 4227530 Aip03g04982 03 134500192 134504476 PCT