Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03423 ATGGGAAGCTACTGGGTTCATGTGTGTTTATTTATGACATTATTAATGGTCATAATAGGAGTCACAATTGCAAGAGGAAATAATGAAGATGCAGAGGTGACTTATGATGGAAGATCTCTTATCATTGGTGGCCATAGGAAAATTCTCTTCTCTGGCTCCATTCACTATCCCCGCAGCACTCCTCAGATGTGGCCAGATTTGATAGCGAAAGCAAAAGAAGGAGGACTGGACGTTATTCAAACCTACGTATTTTGGAATATCCATGAACCCCAACCCGGCCAGTATGATTTCAGCGGCAGATACGATTTAGTGAGATTTATAAAGGAGATTGAAGCTCAAGGGCTATATGTGTGCCTTAGAATTGGACCTTACATCGAAAGTGAATGGACATACGGGGGATTCCCATTTTGGTTACATGATGTTCCTGACATTGTTTACCGAACCGACAATGAACCGTTCAAGGCGTACATGCAAAATTTTACGACGAAAATAGTGAGCATGATGCAATCAGAGGGCTTATATGCTTCTCAAGGAGGTCCAATTATATTATCGCAGATTGAGAACGAATATCAAAACATAGAACATTCATTTGGAGAAGAAGGAAGCAGGTATGTTAGTTGGGCTGCTGATATGGCTGCCTCCCTCCAAACTGGCGTACCTTGGGTTATGTGCAAGCAAACCGATGCTCCTGATCCACTGATTAATGCATGTAATGGAATGAGATGTGGCGAAACCTTTACTGGACCAAATTCCCCCAATAAGCCCGCACTCTGGACAGAAAATTGGACTTCTTTCTATCAAGTTTATGGTGGTAAGCCGTACATAAGGTCTGCAGAAGATATTGCATTCCATGTCACTCTTTTTATTGCAAGAAAAAATGGAAGCTATGTCAACTACTATATGTACCATGGAGGAACTAACTTTGGGAGATCAAGCTCAGCCTATGTTATAACATCTTATTATGATCAAGCTCCACTTGATGAATATGGTCTATTAAGACAACCCAAGTGGGGTCATCTTAAGGAGATGCATGCTGCAATTAAATCTTGTTCTACCACCTTACTGCAAGGGATGCAGAGGAATTTCACCTTAGGTGAACTGCAGGAGGGTTATGTTTTTGAAGAAGAAGAAGAAGAAGAGGGGGGATGTGTTGCTTTCCTTGTAAATAATGACAGTGTGAATAAAGTTACTGTTCAATTCCAAAACAGATCATACGAATTGCCAAAAAAATCAATAAGTATCCTACCAGATTGTCAAAATGTGACTTTCAATACTGCAACTGTAAATACTAACAGCAACACAAGAGTAATAAATCCAGTACAAACCTTCAGCTCTGCTGACAAATGGGATCAATTTCAAGATGTCATCCCAAACTTTGATGACACTTGCTTAATATCAGACTCACTACTGGAGCATATGAACCTAACCAAAGACAATACGGATTACCTTTGGTATACTCTAAGGTTTGAACAAAATTCGCCTTGCAGTGAAGCAATACTTCATCTTAAGTCTGCTGCTCATGTTGCCCATGCTTTTGTGGACGATACATACATAGGAGGGGATCATGGAAATCACAATGACAAGTCTTTCATCTTAGAGGTCCCCGTTGAACTAAATGAAGGGACACATAATATTTCTATTCTCAGCGTTATGGTTGGACTCCCGGATTCAGGGGCATTTCTTGAAAGAAGGTTTGCTGGTTTAACCACAGTGGAAATTCGGTGTAGCGAAGAGTCCCATGACTTGACCAATGCTACATGGGGATATCAGGTAGGATTACTGGGGGAAAAGTTAGAAATATATGAAGAACAGAATAGCAATTCTAATGAATGGTGTGAACTAGGGGACAACCCTAGTAATCAGACACTCGTTTGGTACAAGAATGTATTTGATTCACCTGAGGGAGATGAGGCAGTTGCACTGAACCTCGAGTCAATGGGAAAAGGCGAAGCTTGGGTGAATGGACAAAGCATTGGTCGCTATTGGGTCTCATTCCATGATTCCAATGACCAACCTTCTCAAACACTGTACCACGTGCCGCGGTCGTTCCTTAAGGACAGCGGAAATGTTTTGGTTTTGTTTGAGGAGGGAGGTGGAAATCCTCTTCGTATCTCACTCAACACTGTTTCTGTTTCTCTTTCATCCTCATAG 2151 0.4133 MGSYWVHVCLFMTLLMVIIGVTIARGNNEDAEVTYDGRSLIIGGHRKILFSGSIHYPRSTPQMWPDLIAKAKEGGLDVIQTYVFWNIHEPQPGQYDFSGRYDLVRFIKEIEAQGLYVCLRIGPYIESEWTYGGFPFWLHDVPDIVYRTDNEPFKAYMQNFTTKIVSMMQSEGLYASQGGPIILSQIENEYQNIEHSFGEEGSRYVSWAADMAASLQTGVPWVMCKQTDAPDPLINACNGMRCGETFTGPNSPNKPALWTENWTSFYQVYGGKPYIRSAEDIAFHVTLFIARKNGSYVNYYMYHGGTNFGRSSSAYVITSYYDQAPLDEYGLLRQPKWGHLKEMHAAIKSCSTTLLQGMQRNFTLGELQEGYVFEEEEEEEGGCVAFLVNNDSVNKVTVQFQNRSYELPKKSISILPDCQNVTFNTATVNTNSNTRVINPVQTFSSADKWDQFQDVIPNFDDTCLISDSLLEHMNLTKDNTDYLWYTLRFEQNSPCSEAILHLKSAAHVAHAFVDDTYIGGDHGNHNDKSFILEVPVELNEGTHNISILSVMVGLPDSGAFLERRFAGLTTVEIRCSEESHDLTNATWGYQVGLLGEKLEIYEEQNSNSNEWCELGDNPSNQTLVWYKNVFDSPEGDEAVALNLESMGKGEAWVNGQSIGRYWVSFHDSNDQPSQTLYHVPRSFLKDSGNVLVLFEEGGGNPLRISLNTVSVSLSSS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03423 716 Gene3D Glycosidases 30 351 - -
Aip03g03423 716 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 178 190 IPR019801 GO:0004553|GO:0005975
Aip03g03423 716 Gene3D - 584 714 - -
Aip03g03423 716 SUPERFAMILY Galactose-binding domain-like 586 710 IPR008979 -
Aip03g03423 716 Gene3D - 449 583 - -
Aip03g03423 716 PANTHER BETA-GALACTOSIDASE RELATED 29 712 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 Pfam Beta-sandwich domain in beta galactosidase 354 428 IPR041392 -
Aip03g03423 716 SUPERFAMILY (Trans)glycosidases 32 350 IPR017853 -
Aip03g03423 716 PANTHER BETA-GALACTOSIDASE 6 29 712 - -
Aip03g03423 716 Pfam Glycosyl hydrolases family 35 39 346 IPR031330 -
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 43 60 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 64 82 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 119 138 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 176 191 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 257 272 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 295 310 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 314 330 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Aip03g03423 716 SUPERFAMILY Galactose-binding domain-like 412 568 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03423 Aip-Chr3 112030265 112035713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g03423 1 711 Glycoside Hydrolase AT5G63800 62.570 0.0 938
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03423 - - gmx:100782510 1148.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03423 03 112030265 112035713 Aip03g03423 03 112030265 112035713 ECH
Aip03g03423 03 112030265 112035713 Aip08g03185 08 122563017 122578667 ECH