Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g03376 ATGATGGCCGAGGAAGCTCCAAAGAACCAAGAGGCGGTGGTGGTTACACATGTTCCGCCGCCTGAGGCCGAGGAGGAGAAGAAGCAGCCCGTGACTTTGGGCACTCACCTCTCCAAGCTTCCGGAATCAGGAACCTTCAAGGAAGAAAGCACCAAGCTTTCTGATCTCCCTGAGACCCACAACAAGGCGCTACAAGAACTCAAGAGCCTCGTTCAGGAAGCTCTTAATAACCACCAATTCTCTGTCCCTAACCAACCCAAGCAACAACACAAGCCTGAAGAAGCTGTAACTGCTGAGAAAGAAAGTGAAACGAAAGAGGAAGAAAAAGTTTCTGAACCTGCCACGAAAACAGACAACGAGGACGAGGTGGGAGAAGAAGTGAAAGAAACCGCAGTGGTTGAGGTTGAAGAAAAGGTGGTGGCTGCTCCATCCATTGATGATGATGGTGCAAAAACTGTTGAGGCTATTGAAGAGACCGTTGTTGCTGTCTCTGTTTCAACAACAGAGAGTCCACATCGACCGGCACAGAAAGTTTGCCAAGAAGCCAAGGAGGACGTGCCATTGCCACCGGAAGAGGTATCCATTTGGGGGATACCGCTGCTTGCAGACGAAAGAAGCGACGTCATCCTCTTGAAGTTCCTGCGCGCCAGAGACTTCAAAGTGAAAGACGCTTTCGCCATGATGAAGAATACAATCCGGTGGAGGAAAGAGTTCGGAATCAATGAGCTAATGGAGGAGAATTTAGGTTGTGATGAACTGGAGAAGGTGGTGTTCATGCATGGATTCGACAAAGAAGGACACCCTGTTTGTTACAACATATTCGGCGAGTTCGAGAACAAGGAGCTGTATAAGAAGACATTCTCTGATGAGGAGAAGAGGCAGAGGTTCCTGAGATGGAGGATTCAGTTCTTGGAGAAGAGTATTAGGAAACTGGACTTCAACCCTGGCGCCATTTCCACCATTGTTCAGGTCAATGATCTCAAGAACTCGCCTGGTCTTGCCAAGTGGGAGCTTAGACAAGCTACCAAAGAAGCCCTTCAGCTACTTCAGGACAATTACCCTGAATTTGTGGCCAAACAGGTTCATCTTTTTCGTTATTCTCAAATTGCATGCAAATCACAAGTCATATAA 1131 0.4783 MMAEEAPKNQEAVVVTHVPPPEAEEEKKQPVTLGTHLSKLPESGTFKEESTKLSDLPETHNKALQELKSLVQEALNNHQFSVPNQPKQQHKPEEAVTAEKESETKEEEKVSEPATKTDNEDEVGEEVKETAVVEVEEKVVAAPSIDDDGAKTVEAIEETVVAVSVSTTESPHRPAQKVCQEAKEDVPLPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFAMMKNTIRWRKEFGINELMEENLGCDELEKVVFMHGFDKEGHPVCYNIFGEFENKELYKKTFSDEEKRQRFLRWRIQFLEKSIRKLDFNPGAISTIVQVNDLKNSPGLAKWELRQATKEALQLLQDNYPEFVAKQVHLFRYSQIACKSQVI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g03376 376 SMART CRAL_TRIO_N_2 206 231 IPR011074 -
Aip03g03376 376 MobiDBLite consensus disorder prediction 1 126 - -
Aip03g03376 376 PANTHER PATELLIN-3 PROTEIN 8 363 - -
Aip03g03376 376 MobiDBLite consensus disorder prediction 92 126 - -
Aip03g03376 376 Pfam CRAL/TRIO domain 255 359 IPR001251 -
Aip03g03376 376 SUPERFAMILY CRAL/TRIO domain 256 359 IPR036865 -
Aip03g03376 376 MobiDBLite consensus disorder prediction 42 62 - -
Aip03g03376 376 MobiDBLite consensus disorder prediction 70 91 - -
Aip03g03376 376 CDD SEC14 252 365 IPR001251 -
Aip03g03376 376 Pfam CRAL/TRIO, N-terminal domain 191 230 IPR011074 -
Aip03g03376 376 Gene3D - 176 369 IPR036865 -
Aip03g03376 376 PANTHER PATELLIN-1 8 363 IPR044834 GO:0008289
Aip03g03376 376 SUPERFAMILY CRAL/TRIO N-terminal domain 51 247 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g03376 Aip-Chr3 110619766 110622603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g03376 - - gmx:100804544 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g03376 03 110619766 110622603 Aip03g03376 03 110619766 110622603 ECH
Aip03g03376 03 110619766 110622603 Aip08g03235 08 123197752 123201378 PCT