Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02444 ATGGAGAGAAAAATTCATGTGGTGCCTGTGGTGTTGTTCTTGTGGGTTTGTACTTGTGTAACTGCTTCTGTTACATATGATCACAAATCTCTTATTATAAATGGGAAAAGAAGGATCTTGATATCTGGCTCCATTCACTATCCAAGAAGCACACCCCAGATGTGGCCGGACCTTATTCAAAAGGCCAAAGACGGCGGCCTTGATGTCATTCAGACCTATGTCTTCTGGAATGGACATGAGCCTTCTCCTGGAAATTATTATTTTCAAGATAGGTATGACTTGGTGAGATTCGTCAAGCTGGTTCAACAAGCTGGCCTTTATGTTCATCTCCGCATTGGTCCTTATGTTTGTGCTGAATGGAACTTCGGGGGATTCCCTATTTGGCTAAAATATGTTCCGGGTATTGAGTTCAGAACAGACAATGGACCTTTCAAGGCGGCAATGCAAAAATTCACTCAGAAAATTGTAAGCTTGATGAAATCAGAGGGGTTGTTTCAAAGCCAGGGAGGTCCAATAATCATGTCTCAGATAGAGAATGAGTATGGACCAGTGGAGTGGGAAATTGGTGCTCCTGGAAGATCATACACAAGATGGGCTGCATCAATGGCTGTGGCTCTTGACACTGGTGTTCCATGGGTTATGTGCAAGCAACAAGATGCTCCTGATCCTGTTATTGACACCTGCAATGCCTTCTACTGCGAAGGCTTCACTCCCAACAAGAATTACAAGCCCAAGATGTGGACTGAGAATTGGACTGGCTGGTATATACCTCATAAAAATGCTACCATTTTTGAGAATTTTTCACCTTTGTTGTTTCAATCTTCTATTCAACTCTGCCATTTTTGTAGGTACACTGCTTTTGGTGGCGCAACCCCCATCAGACCAGCAGAAGACATAGCATTCTCGGTTGCCAGATTCATTCAGAATCGCGGCTCGTTTGTTAATTACTATATGTATCATGGAGGAACTAACTTCGGCCGCACGGCTGCCGGCCGTTTCATCGCCACAAGCTATGACTACGACGCTCCCCTAGACGAATATGGACTACCAAATGAACCAAAATGGACTCATTTGAGAGATTTGCATAAAGCAATTAAACAATGTGAGCCATCTTTGGTGGCTGTGGATCCAACACTTATACTCATTGCTAACAACATTGAGGCACATGTCTACAAGACAACCACTTCCTGTGCTGCATTCCTTGCAAATTACAACACCGGATCTTCCGCGAAAGTTAGATTTGGAAACGGGGTATATGATGTACCGGCTTGGTCTATTAGTATCCTTCCTGACTGCAAGACTGAAGTTTTCAACACTGCAAAGGTTAGTGCCCTGAGATTCGAGAGGAAGATGACTCCGGTAATCGGTAGATTTGGTTGGCTGTCATTCAATGAAGTACCCGAGTCGTCGGGTCCAAATGATCGCCTTACTGCAGATTCACTCTTGGAGCAGGTTTATGTAACCAAGGACTCTTCAGATTATTTGTGGTACATGACAGATGTCAACATTAGCCCTAATGAAGGTTTCCTAAGGAATGGTCAATCTCCTGTTCTTACAGCAATGTCAGCAGGGCATGTTCTGCATGTTTTCATTAATGGACAACTTTCAGGAACTGCGTATGGTGGATTGGATAATCCTAAGTTGACATTTAGTGACAGTGTTAAGCTAAGGGCTGGAAACAACAAGATTTCTTTACTTAGTGTCGCCGTCGGTCTCCCGAATGTGGGTACACACTTTGAGAAATGGAATGCTGGGGTGTTAGGTCCAGTCACATTGAAGGGTCTAAATGAAGGGACAAGAGACCTATCTAAGCAGAAATGGTCTTACAAGGTTGGTCTGAAAGGCGAATCATTGAGCCTTCATACTGAAAGTGGGAGTAGCTCTGTTGATTGGGTACAAGGATCACTGCTAGCTGTAAAACAACCTTTGACATGGTACAAGACAACTTTTAGCGCTCCAGCCGGCAATGAACCGTTGGCTTTAGATATGAGTACCATGGGAAAGGGTGAAATATGGATAAATGGTCAGAGCATCGGTCGCCATTGGCCTGGATACAAGGCAGGCGGTAATTGTGGTGCTTGCAACTATGCCGGAACTTACACTGAGAAGAAATGCCTTACAAACTGTGGACAACCTTCCCAGAGATGGTACCATGTTCCTCGCGCATGGCTAAGACCAGGTGGGAACTCCTTGGTTGTGTTTGAGGAGTGGGGAGGAAATCCTGCAGGGATTTCTTTGGTGAAGAGAACATGA 2253 0.4452 MERKIHVVPVVLFLWVCTCVTASVTYDHKSLIINGKRRILISGSIHYPRSTPQMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFQDRYDLVRFVKLVQQAGLYVHLRIGPYVCAEWNFGGFPIWLKYVPGIEFRTDNGPFKAAMQKFTQKIVSLMKSEGLFQSQGGPIIMSQIENEYGPVEWEIGAPGRSYTRWAASMAVALDTGVPWVMCKQQDAPDPVIDTCNAFYCEGFTPNKNYKPKMWTENWTGWYIPHKNATIFENFSPLLFQSSIQLCHFCRYTAFGGATPIRPAEDIAFSVARFIQNRGSFVNYYMYHGGTNFGRTAAGRFIATSYDYDAPLDEYGLPNEPKWTHLRDLHKAIKQCEPSLVAVDPTLILIANNIEAHVYKTTTSCAAFLANYNTGSSAKVRFGNGVYDVPAWSISILPDCKTEVFNTAKVSALRFERKMTPVIGRFGWLSFNEVPESSGPNDRLTADSLLEQVYVTKDSSDYLWYMTDVNISPNEGFLRNGQSPVLTAMSAGHVLHVFINGQLSGTAYGGLDNPKLTFSDSVKLRAGNNKISLLSVAVGLPNVGTHFEKWNAGVLGPVTLKGLNEGTRDLSKQKWSYKVGLKGESLSLHTESGSSSVDWVQGSLLAVKQPLTWYKTTFSAPAGNEPLALDMSTMGKGEIWINGQSIGRHWPGYKAGGNCGACNYAGTYTEKKCLTNCGQPSQRWYHVPRAWLRPGGNSLVVFEEWGGNPAGISLVKRT 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02444 750 Pfam Glycosyl hydrolases family 35 30 364 IPR031330 -
Aip03g02444 750 Pfam Beta-sandwich domain in beta galactosidase 373 442 IPR041392 -
Aip03g02444 750 Gene3D - 619 750 - -
Aip03g02444 750 SUPERFAMILY Galactose-binding domain-like 606 746 IPR008979 -
Aip03g02444 750 SUPERFAMILY Galactose-binding domain-like 426 596 IPR008979 -
Aip03g02444 750 SUPERFAMILY (Trans)glycosidases 24 369 IPR017853 -
Aip03g02444 750 Gene3D - 468 605 - -
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 167 182 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 668 684 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 34 51 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 110 129 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 312 327 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 332 348 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 641 655 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PRINTS Glycosyl hydrolase family 35 signature 55 73 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 Gene3D Glycosidases 17 369 - -
Aip03g02444 750 PANTHER BETA-GALACTOSIDASE RELATED 282 750 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PANTHER BETA-GALACTOSIDASE 7 258 - -
Aip03g02444 750 PANTHER BETA-GALACTOSIDASE RELATED 7 258 IPR001944 GO:0004553|GO:0005975
Aip03g02444 750 PANTHER BETA-GALACTOSIDASE 282 750 - -
Aip03g02444 750 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 169 181 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02444 Aip-Chr3 40366417 40370956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02444 11 749 Glycoside Hydrolase AT3G13750 68.868 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02444 - - gmx:100781959 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03350 01 136582971 136588320 Aip03g02444 03 40366417 40370956 PCT