Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03350 ATGGAGAGTTTGGTGATGAGTGGGAAGAAGCTTTGTGTGATGGTGTTATGTTTGTACTGGGTTCATGCAGTGACAGCTTCTGTTACATATGATCACAAAGCAATTGTTGTTAATGGGCAGAGAAAGATTCTGTTTTCTGGTTCTATACACTACCCCAGAAGCACACCTCAGATGTGGCCAGAGCTTATTCAAAAAGCTAAAGAGGGAGGGGTGGATGTTATTCAAACCTATGTGTTTTGGAATGGCCATGAACCTTCTCCAGGAAAATATTATTTCGAGGATAGGTACGACTTAGTTAAGTTCATCAAGGTAGTGCAGCAAGCTGGACTTTATGTTAATCTCCGAATTGGTCCCTACATATGTTCTGAATGGAACTTTGGGGGTTTTCCTGTTTGGCTAAAGTTTGTTCCAGGCATTGCTTTCAGAACAGATAATGAGCCTTTCAAGGCAGCAATGCAGAAGTTCACTGAGAAGATTGTGAGTATGATGAAGGCTGAGAATCTGTTTGAGACACAGGGGGGTCCAATAATTCTGTCACAGATAGAGAATGAGCTTGGACCAGTGGAATGGGAAATTGGTGATCCTGCAAAAGCTTATGCAAAATGGGCAGCTAAAATGGCTGTAGGTCTAGACACTGGTGTCCCTTGGATTATGTGCAAGCAAGAAGATGCTCCTGACCCTGTTATTGACACATGCAATGGATATTACTGTGAAAACTTCACTCCCAACAAGAACTACAAACCAAAAATGTGGACAGAAAACTGGACAGGCTGGTGCACTTATTTTGGTGGTGGAGTTAATATTAGACCAGCAGAAGACTTGGCATTCTCAGTTGCTAGGTTCATACAAAATGGTGGTTCATTTGTTAACTATTATATGTATCATGGAGGAACTAACTTCGAGCGAACATCTGGTGGCCCCTTCATTACCACTAGCTATGACTATGATGCTCCAATTGATGAATATGGACTTTTAAATGAACCAAAATGGGGACATTTGAGAGATTTGCACAAAGCAATAAAGCTGTGTGAACCAACTTTGATATCTGTAGATCCAAAGGTGACATCACTTGGAAATAACCTCGAGGCACATGTGTTCAAGACAGATTCTGGTGCTTGTGCTGCATTCCTTGCAAACTATGACACCAATTCTTCTGCAAAAGTTTCATTTGGAAATGAGCAATATGAACTACCACGTTGGTCCATAAGCATTCTTCCTGACTGCAAAACTGAAGTTTTCAACACTGCAAGGATTGGTGCTCAAAGCTCCCAGAAGAAGATGACTGTTGTAAAGAATGCATTTGTTTGGGAGTCATACATTGAAGAACCTGCGTCGTCCAGCGAAGAGGATTCCATCACAGCGAATGCGCTTTGGGAGCAGATCAACATCACTAGAGATTCTACAGATTATTTGTGGTATATGACAGATGTCAATATTGGTCCTAATGAAGGTTTTATAAAGAGTGGAAAATGGCCTCTTCTTACAGTAATGTCAGCAGGCCATGCTTTACTAGTTTTCATTAATGGCCAACATTCAGGAACTTCTTACGCCGGAGCCAATTTTCCTAAACTAACATTTAATCAAACTGTTAATCTAAGGGCTGGCAACAACAAGATTTCTTTACTTAGTATTGCCGTCGGCCTCCCGCATGTTGGCATACACTTTGAGACATGGAATGTTGGGGTGTTAGGCCCTGTGACACTTGAGGGTGTAAATGAAGGGACCAGAGATTTGTCTCACCAGAAATGGTCTTACAAGGTTGGTCTGAAAGGTGAAGCCTTAGGCCTTCAAACCGTGAGTGGGAGTGGCTCTGTTGAATGGGCACAAGGATCCTTATTGGCTAAGAAACAACCTTTGACATGGTACAAGACAAATTTTAACAAACCAGAAGGAAATGATCCATTGGCTCTAGACATGATCAGCATGGGAAAAGGTCAAGTATGGATAAATGGCCGGAGCATCGGCCGCCATTGGCCAGGATACATAGCACACGGAATTTGTTGGGATTGCGACTATGCCGGATCTTACACTGACAAGAAATGCAAAAAAAACTGTGGAGAACCTAGCCAGAGATGGTACCATGTTCCGAGGTCATGGCTGAAGCTGAGTGGGAACTATATGGTTGTGTTTGAAGAATGGGGAGGTGACCCTACAAGGATTTCTTTGGTGAAAAGAACAACAGATAGTGTGTGTGCTGATATATATGAAGATCAACCAACTCTGAAGAACAAGGAGAAGCTGGATTCTGGAAATGTTATTAGGCCAAAAGCACATTTGTGGTGTCCTCCAGGACAAAAGATGTCACAGATTAAGTTTGCTAGCTATGGTTTGCCACATGGAAGTTGTGGAAACTATAGACAAGGAGATTGTCATGCTCACAAATCATATGATGCTCCTCAAAGGAACTGCATTGGCAAACAATCATGCATGGTAACCGTTGCTCCTGAAGTTTTTGGGGGAGACCCATGTCCAGGAATTGCTAAGAAGCTCTCAGTTGAGGCCATATGCAGATAG 2514 0.4244 MESLVMSGKKLCVMVLCLYWVHAVTASVTYDHKAIVVNGQRKILFSGSIHYPRSTPQMWPELIQKAKEGGVDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKVVQQAGLYVNLRIGPYICSEWNFGGFPVWLKFVPGIAFRTDNEPFKAAMQKFTEKIVSMMKAENLFETQGGPIILSQIENELGPVEWEIGDPAKAYAKWAAKMAVGLDTGVPWIMCKQEDAPDPVIDTCNGYYCENFTPNKNYKPKMWTENWTGWCTYFGGGVNIRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFERTSGGPFITTSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPTLISVDPKVTSLGNNLEAHVFKTDSGACAAFLANYDTNSSAKVSFGNEQYELPRWSISILPDCKTEVFNTARIGAQSSQKKMTVVKNAFVWESYIEEPASSSEEDSITANALWEQINITRDSTDYLWYMTDVNIGPNEGFIKSGKWPLLTVMSAGHALLVFINGQHSGTSYAGANFPKLTFNQTVNLRAGNNKISLLSIAVGLPHVGIHFETWNVGVLGPVTLEGVNEGTRDLSHQKWSYKVGLKGEALGLQTVSGSGSVEWAQGSLLAKKQPLTWYKTNFNKPEGNDPLALDMISMGKGQVWINGRSIGRHWPGYIAHGICWDCDYAGSYTDKKCKKNCGEPSQRWYHVPRSWLKLSGNYMVVFEEWGGDPTRISLVKRTTDSVCADIYEDQPTLKNKEKLDSGNVIRPKAHLWCPPGQKMSQIKFASYGLPHGSCGNYRQGDCHAHKSYDAPQRNCIGKQSCMVTVAPEVFGGDPCPGIAKKLSVEAICR 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03350 837 Gene3D - 752 837 IPR043159 -
Aip01g03350 837 SUPERFAMILY Galactose-binding domain-like 582 742 IPR008979 -
Aip01g03350 837 Gene3D - 596 668 - -
Aip01g03350 837 SUPERFAMILY Galactose-binding domain-like 402 572 IPR008979 -
Aip01g03350 837 Gene3D Glycosidases 21 343 - -
Aip01g03350 837 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Aip01g03350 837 ProSiteProfiles SUEL-type lectin domain profile. 751 837 IPR000922 GO:0030246
Aip01g03350 837 PANTHER BETA-GALACTOSIDASE RELATED 11 830 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Aip01g03350 837 Pfam Galactose binding lectin domain 759 836 IPR000922 GO:0030246
Aip01g03350 837 PANTHER BETA-GALACTOSIDASE 11 830 - -
Aip01g03350 837 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Aip01g03350 837 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03350 Aip-Chr1 136582971 136588320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03350 5 836 Glycoside Hydrolase AT3G13750 67.742 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03350 - - adu:107496611 1741.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03350 01 136582971 136588320 Aip01g03350 01 136582971 136588320 ECH
Aip01g03350 01 136582971 136588320 Aip03g02444 03 40366417 40370956 PCT