Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01931 ATGGAGTCGATCCTAGCGAGAGCTCTGGAGTACACTCTCAAGTATTGGCTCAAATCCTTCTCCAGAGAGCAGTTCAAGTTGCAGGGTCGCACTGTTCAGCTCTCCAATTTAGATATAAATGGTGATGCATTGCATGCTAGCGTTGGATTGCCACCTGCACTCAATGTAACCACCGCCAAAGTTGGCAAATTGGAGATTATGCTACCGTCAGTGAGCAGTGTGCAGATAGAGCCAATTTTTGTGCAAATTGATCGGTTGGATTTGGTTCTAAAGGAGAATTCTGATTATGAAAGGCCGCCCGAGAATCATGCTAGCATCACGCCATCAAGTGCCTCTTCAAAGGGTAGTGGTTATGGTTTTGCTGATAAGATTTCAGATGGAATGACTATACAAATTCAAACAGTTAATTTATTACTTGAAACTCATGGGGGTGCCCGTCCCCAAGGGGGAGCAGCATGGGCACCTCCTATGGCATCTGTCACCATACGCAATTTGTTGCTGTATACAACAAATGAAAGCTGGGAGGTTGTAAATCTTAAGGCGGCAAGGGAGTTCTCAAGTAATACGAAGTATATATATGTATTCAAAAAACTGGAGTGGGAATCTTTGTCTATTGATCTTTTGCCTCATCCTGACATGTTCACGGATGATACTTTAGGCCGCTCTCAAGAGCGAGCAAACATGAGAGATGATGATGGTGCAAAACGAGTATTCTTTGGAGGGGAGCGTTTTTTAGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACAGTCTCCAACAGTCCACTTGGGCTTGAGGTTCAGTTGCACATTACAGAAGCCCTTTGCCCTGCATTAAGTGAGCCAGGACTTCGTGCACTTCTCCGCTTTATGACAGGATTATCTGTCTGTCTAAACAGGGGAGATGTAAATTTGAAGGCCCAGAAGGCAAGTCTTTCGGAGGGAGAAAATGACAGTAGTTTGACCAGGATTACCATTGCAGGTCTATTTTTAAGTGACAAGTTTTCACACCCGCCATGTACGTTAGTGCAGCCATCTATGCATTCTGTTAAAAGAGAGTCTTTTCATGTGCCAGAATTCGCTAGAAGCTTTTGCCCTCCAATATATCCACTTGGAGAACAGCAGTGGCAATTGATTGAGGGAACTCCTCTAATCTGCCTTCATTCCCTTCAGATTGTGCCTTCTCCACTTCCACCAGTTTTTGCTTCTCAAACAGTTATTGACTGTCAGCCTCTTATGATTCATCTTCAGGAAGAAGCTTGCCTTAGAATATCTTCTTTCTTAGCTGATAGAATTGTTGTCAATTCTGGTGATATTTTACCAGATTCCTCAATAAACTCTCTTTTCTTCACTCTCAGTGGACTGGATATTATGGTTCCTCTGGACAAGGCCCAGTTGGATATTTCTAAAAGCAACACAGATAATGTAGTCCAAACCTCCTTTGCTGGTGCAAGGCTTCATATTGAAGACTTTTCATATATAGATTCACCATCAATGAAACTAAGAATGCTTAAACTGGATAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCCAGAGAAAGTGGAGTGCCAGAGCAGCCCAGATTACTTTATCTCTGGAAGCATGTACTGGCCCACCTGCACGTCAAAATTCTCTTGGATGGACCACAGGACTATGGAGATGTGTTGTTCTGAAAGGTGCTTGGATTGAAGTAGCTATGACAACTGCCGATGGCAGTCCATTGTTAAAGGTTCCTCCTCCAGGAGGTATTGTGAGAGTTGGTGTTGCTTGTGAACAGTTTCTGTCCAATAGTTCTGTTGAACAATTATTTTTTATCTTGGATCTTTACGTGTATTTTGGGAGAGTTAGTGAGAAAATAGCAGTGGCTGGAAAAAGGAAACAATTGGAGGGGGTTAAGAACAAATCTTCTAGCGAAAAGTTAATGGACATAACTCCTAGTGACAGTGCTGTAAGTTTAGCAGTTAAAGACCTTCAACTTCGATTTCTTGAGTCTTCACCATTGAATGTCGAGGGAATGCCTCTAGTGCAGTTTGTTGGAAATGATTTGTTAATTAGTGCCACTCATAGAACCTTTGGTGGTGTTATTGTTATTTCGTCCACCTCACGCTGGGAGAGTGTTCAGATAGATTGCGTGGATGCTGAGAAGCACATAGCAGGAGAGAATGGCTCATTCTTAAGTTCTGGAGAAAATATTCCTTCAAGCAGTGGAGACTGTCAACTGAGAACTGTATTCTGGATACATAACAAGAGGAACCATCTATTGAACAGAAATGCTCCTTCAATCCCTTTTCTGGATGTAAACATGGTGCATGTCATACCATTGGGGGAACAAGATAGAGAGTCTCATTGTTTGAATGGCTCAGCTTCTGTATCTGGTATTCGTCTTGGTGGGGGAATGAACTATGCTGAAGTCCTCCTACATCAATTTGGAATACTTGGTCCTGATGGTGGTCCTGGGAAGGGTCTTTGTAAAGGCTTAGAAAAGTTACAGGCAGGACCATTGGCAACAATTTTCAAGACAACGCCTCCCGATGTTGATAATTCAGAAGATGGAAGTTTGAGCAAAGGGAAAGAAACCAGTTTTCCAAAATTGAAGAAGCCAGATAATGTGGATATAACCATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGGGCACAAGAGATGGCTGAAAGGTGGTGGATATCTAGCCCAGAAAATGTAAGTAGAGAAGAGAGGTGTTGGCACACAACTTTCCAAAGTTTGCAAGTAATTACAAGAAGCAGCCCAAAGAATGTTCTGGGTGAAAAAGCGCCAGCACGTAGAAAACAACAGTATCCTGTGGAACGGGTTACAGTTGGAATCCAAGGGCTGCAGATCATGAAGCCGCAGAGACCGAAAGAGATTCATTTGTCAAAATCAATTGCAAATGGTGCTAAAGAAGTTAACGGCACTGCTACAGGAATTTGTCTTCAGCTGGATTTGGTATCAAGTGAGGATAATGTTGAAGTTGAAATGGCTAATTGGGAAGTGGAAAATCTAAAGTTCACTGTTAAGCAACCGATAGAGGTGGTTTTAACCAGTGATGAGGCTCAACACCTTACTTTTCTGTGCAAATCTGAAGTTGATTCCATGGGCCGGATAGCAGCTGGAATTCTAAGAGTGCTTAAGCTCGAAGGTTCGGTCGGCCATTCTGTAATGGATCAACTAGGCAACTTAGGAAGTGAAGGCATTGACAAGATTTTCTCTCCTAAGCATAGCAGAGATGATAGTGTCCACAATAGAGGATTTTGTCCATCACCGAAGCTGGTAAGCAAAAGCTTGCACAAATCAACGATGGAACCGACATTAACTTTGCTCGAGGAAGCAGTTGCAGATTCACAGGAAAAGATCAATGCCTTAATCAGTGATTTTGGTATTTCAGAGTCCTCTGGGCAGCAACTTACCATTGCTAAAGAACTCAGTCAAAAGATTGAATCAATGGAGGGTTTATTGAAGCAATTACGGAATAAAACTTAA 3525 0.4238 MESILARALEYTLKYWLKSFSREQFKLQGRTVQLSNLDINGDALHASVGLPPALNVTTAKVGKLEIMLPSVSSVQIEPIFVQIDRLDLVLKENSDYERPPENHASITPSSASSKGSGYGFADKISDGMTIQIQTVNLLLETHGGARPQGGAAWAPPMASVTIRNLLLYTTNESWEVVNLKAAREFSSNTKYIYVFKKLEWESLSIDLLPHPDMFTDDTLGRSQERANMRDDDGAKRVFFGGERFLEGISGEAYITIQRTVSNSPLGLEVQLHITEALCPALSEPGLRALLRFMTGLSVCLNRGDVNLKAQKASLSEGENDSSLTRITIAGLFLSDKFSHPPCTLVQPSMHSVKRESFHVPEFARSFCPPIYPLGEQQWQLIEGTPLICLHSLQIVPSPLPPVFASQTVIDCQPLMIHLQEEACLRISSFLADRIVVNSGDILPDSSINSLFFTLSGLDIMVPLDKAQLDISKSNTDNVVQTSFAGARLHIEDFSYIDSPSMKLRMLKLDKDPACFCLWEGQPIDASQRKWSARAAQITLSLEACTGPPARQNSLGWTTGLWRCVVLKGAWIEVAMTTADGSPLLKVPPPGGIVRVGVACEQFLSNSSVEQLFFILDLYVYFGRVSEKIAVAGKRKQLEGVKNKSSSEKLMDITPSDSAVSLAVKDLQLRFLESSPLNVEGMPLVQFVGNDLLISATHRTFGGVIVISSTSRWESVQIDCVDAEKHIAGENGSFLSSGENIPSSSGDCQLRTVFWIHNKRNHLLNRNAPSIPFLDVNMVHVIPLGEQDRESHCLNGSASVSGIRLGGGMNYAEVLLHQFGILGPDGGPGKGLCKGLEKLQAGPLATIFKTTPPDVDNSEDGSLSKGKETSFPKLKKPDNVDITIELRDWLFALEGAQEMAERWWISSPENVSREERCWHTTFQSLQVITRSSPKNVLGEKAPARRKQQYPVERVTVGIQGLQIMKPQRPKEIHLSKSIANGAKEVNGTATGICLQLDLVSSEDNVEVEMANWEVENLKFTVKQPIEVVLTSDEAQHLTFLCKSEVDSMGRIAAGILRVLKLEGSVGHSVMDQLGNLGSEGIDKIFSPKHSRDDSVHNRGFCPSPKLVSKSLHKSTMEPTLTLLEEAVADSQEKINALISDFGISESSGQQLTIAKELSQKIESMEGLLKQLRNKT 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01931 1174 Coils Coil 1153 1173 - -
Aip03g01931 1174 Coils Coil 1119 1139 - -
Aip03g01931 1174 Pfam N-terminal region of Chorein or VPS13 1 97 IPR026854 -
Aip03g01931 1174 MobiDBLite consensus disorder prediction 849 873 - -
Aip03g01931 1174 PANTHER UNCHARACTERIZED 1 313 IPR026728 -
Aip03g01931 1174 PANTHER UNCHARACTERIZED 311 1173 IPR026728 -
Aip03g01931 1174 MobiDBLite consensus disorder prediction 96 115 - -
Aip03g01931 1174 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 313 - -
Aip03g01931 1174 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 311 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01931 Aip-Chr3 26193043 26203027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01931 - - adu:107477991 2255.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01116 08 14942962 14950499 Aip03g01931 03 26193043 26203027 PCT