Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01701 ATGCCACAGCGACAAGAAACTTTGATGGAACCAAAAATGAACAATGGCAATGGCCATGGACATGGCTGTGCTATTGTGAATGGTTGTACTAGTGATGAAGTAATTGAGTGGTTTGAACAAGTGTCACAGAAGGGTGGTTCTGTTCAGAAAGAGATACTATCCCAGATTCTGAAACAGAACCATGGTGCTGAGTATGTGAAGAAATGGTTGGGGTATCACAACATCCAAGAAATGGATTCATCTGCATTGGAATCACTTTTCACTTCTGTGGTTCCAATTTCTTCTCATGCAGATTTTGAGCCTTTTATCCAAAGGATTGCAGATGGGGACACTAATCCTTTACTCACCCAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGAAGGCAGAAGTTCGTACCTTTTACCCGCCATAGTGCACAAACTACCCTTCAAATTTTCACCTTAGCAGCAGCATACAGATCAAGGGTTTATCCCATAAGAGAAGGAGGAAAGATTCTTGAATTCATATACAGCAGCAACACGTTCAAAACAAAAGGAGGCCTAACGGTAGGAACAGCCACAACACACTACTATGCAAGTGAAGAGTTCAAGATCAAACAAGAACAAACAAAATCTTTCACTTGTAGCCCGGCCGAAGTAATTTCCGGCGGGGACTACAAGCAATCGACATACTGCCACCTCCTCCTCGGCCTCTTCTTCTCCGACCAAGTCGAATTTATAACCTCTGCTTTTGTCTACAGCATAATCCAAGCATTTCGCAGCTTCCAGGAGCTTTGGTGTGAGATATGCAACGATATTAGATCCGGCTCGCTTAGCTCGCGAATTAAGTTGCCAAAGATGAGAAAGGCAGTTTTGGAAATCATTGGTCCAAACCCAATTTTGGCATCAAAATTGGAAAATATTTGCAAGGAGCTAGAATTGGTGGATTGGTTTGGTTTGATTCCAAAGCTTTGGCCAAATGCTAAGTATGTTTATTCAATAATGACAGGGTCTATGCTACCTTATGTGACAAAGCTTAGGCATTATGCAAATGGATTACCTTTGGTTAGTGCTGATTATGGGTCAACTGAGAGTTGGATTGGGGTTAATGTGGATCCAAGTTTGCCACCAGAGAAAGTAACATTCACCGTTGTTCCTACTTTCTCTTACTTTGAGTTCATTCCACTTTATAGACATAATAAGCAAGAAGATTACAGATCAATTGTTGCTGATGATTTTATTGAAGACAAGCCAATTCCACTTTCTCAGGTTAAAGCAGGACAAGAGTATGAAATTGTCCTTACAACTTTCACCGGACTATACAGGTGCAGATTAGGAGATGTGGTAGAGGTGGCAGGATTCCACAACGGGATCCCAAAACTGAACTTCGTATGCAGAAGGAAGTTAATTCTAACTGTAAACATAGACAAGAACACAGAGAAGGACCTCCAATTAGTAGTAGAGAGAGGGTCACAACTTCTGAACAGAGCAAAGAAAGCTGAGCTTGTTGACTTCACCAGCTACGCTCATGTCTCCAACGAACCCGGCCATTACGTGATCTTCTGGGAGATCGACGGTTACGCCGAGGACAGTTTGTTAGAGGCGTGTTGCACCGAGATGGACGCGTCGTTTGCCGATCACGGTTACGTGGTTTCTAGAAAGACCAAGTCAATAGGGCCCCTTGAGCTTTGCATTGTGGAGAGGGGAACATTCAAGAAGATTCTGGACAACTTCATTGCTAATGGGGCTGCTTTGAGCCAGTTCAAGACTCCTAGGTGCACTAGTAACCATGGCATGCTTAATATCCTTAGGGCTTGCGCCCTCAAGAAGTTTCGTAGCACTGCTTACAACACTTGA 1854 0.4229 MPQRQETLMEPKMNNGNGHGHGCAIVNGCTSDEVIEWFEQVSQKGGSVQKEILSQILKQNHGAEYVKKWLGYHNIQEMDSSALESLFTSVVPISSHADFEPFIQRIADGDTNPLLTQQXXXXXXXXXXXXXXGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGKILEFIYSSNTFKTKGGLTVGTATTHYYASEEFKIKQEQTKSFTCSPAEVISGGDYKQSTYCHLLLGLFFSDQVEFITSAFVYSIIQAFRSFQELWCEICNDIRSGSLSSRIKLPKMRKAVLEIIGPNPILASKLENICKELELVDWFGLIPKLWPNAKYVYSIMTGSMLPYVTKLRHYANGLPLVSADYGSTESWIGVNVDPSLPPEKVTFTVVPTFSYFEFIPLYRHNKQEDYRSIVADDFIEDKPIPLSQVKAGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGIPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSQLLNRAKKAELVDFTSYAHVSNEPGHYVIFWEIDGYAEDSLLEACCTEMDASFADHGYVVSRKTKSIGPLELCIVERGTFKKILDNFIANGAALSQFKTPRCTSNHGMLNILRACALKKFRSTAYNT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01701 617 Pfam GH3 auxin-responsive promoter 37 595 IPR004993 -
Aip03g01701 617 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 30 616 IPR004993 -
Aip03g01701 617 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.10 30 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01701 Aip-Chr3 20576585 20583470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01701 31 613 EF-hand Containing Proteins AT1G23160 33.501 7.17e-106 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01701 K14487 - gmx:100792358 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01701 03 20576585 20583470 Aip03g01701 03 20576585 20583470 ECH
Aip08g00878 08 9612059 9624810 Aip03g01701 03 20576585 20583470 PCT