Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01172 ATGGACAAATCAATTTTTATCGAACAAGCTCACTCTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACCACCGCCACCACCGCCGAAACATCTTTCGTCGCCTCCCTCGACCACTTCCTCGCCAACAAATCCCCTTCCACTAAAGACGACACCGCTAGCCCCGATGCTGACATCACCCCCCTCGACGACGCCGCTTCCCGCTCCGAAGCGGATCGCCTCTACTCCGATCCCTACTACCCGGTCGGACTTCCACTTAGGGTTTACGTCTACGACATGCCGAAAAAGTTCACCTACGATCTTCTCTGGCTCTTCCAGAATACTTACAAAGACACCTCCAATCTCACCTCCAATGGCAGCCCCGTTCACCGTCTCATCGAACAGCATTCTATTGATTACTGGCTTTGGGCGGATCTGATTGCTCCTCCGTCGGAGAGGCTGTTGAGAAGTGTTGTTAGGGTCCACCGACAAGAGGAGGCTGATTTGTTCTACGTACCGTTCTTCACAACTATAAGCTTCTTCCTCATGGAGAAACAGCAATGCAAGGCGCTTTATAGGGAGGCTTTGAAGTGGATGACTGATCAACCTGCATGGAAGCGCTCCGATGGAAGAGATCACATACTTCCTATTCATCATCCTTGGTCTTTTAAGTCTGTTCGCAGATACGTGAAGAATGCCATATGGCTGTTGCCAGATATGGATTCCACTGGGAACTGGTACAAGCCAGGACAGGTTTATCTCGAGAAGGACCTGATCCTTCCTTATGTTCCCAATGTTGAATTGTGTGATGCCAGATGTCTGTCGGAAACGAATCCAAAGAGAAGCACACTACTTTTCTTTCGTGGCCGTCTCAAAAGAAATGCGGGAGGAAAGATTCGCTCTAAACTTGGAGCTGAATTAAGTGGAGCTGATGATGTGGTTATACAGGAGGGAACAGCTGGAGAAGGAGGAAAAGAAGCAGCTCAAAATGGCATGCGCAAGTCTCTATTTTGCTTAAGCCCAGCTGGTGACACTCCATCCTCTGCTAGATTATTTGATGCTATTGTTAGTGGATGCATTCCAGTTATAGTGAGTGACGAGCTGGAGCTTCCTTTTGAAGGAATACTTGATTACAGGAAGATAGCCTTGTTTGTCTCTTCCGTTGATGCTGTGAAGCCAGGTTGGCTTCTAAACTTTTTGAAAGGCATTAGTGCTGCTCGTATAAAAGAAATGCAACAAAATCTTTCCAAGTACTCAAGGCATTTCCTGTATTCTAGTCCAGCTCAACCATTGGGTCCTGAAGACTTGGTTTGGAGAATGATGGCTGGGAAGGTGGTGAACATCAAGCTTCATTCCCGAAGATCACAACGTGTAGTTCAAGGGTCTAGAAATGTTTGCACTTGTGAATGCAGACCTGGCAACTCCTCTGAGTTTGTTGGCTTGCTGAGAAATTGCAAGAGAAAGCGTTGGGATCTTATACTTGAGGTTCAATCTTTGTCTTCAAATATGGCGTCAAAACAATTTAAGGGTAGCAGATCATCTCTATCAGCAACTTCTGATGCACCTGAAAACCAGAAGCCTCCTTTACCTCCAACCATAACATTCGGCCGAAGAACTTCGTCGGGTCGCTACATCAGTTACTCTAGAGATGATCTTGACAGTGAGCTAGGAAGCAATGACTTCATGAATTACACAGTGCATTTGCCACCAACCCCAGATAACCAACCTATGGATCCATCAATCTCACAGAAAGTTGAGGAACAATATGTGTCGAATTCACTCTTCACAGGCGGATTCAACAGTGTGACACAAGCACATCTTATGGACAAGGTGATAGAGTCCGAAGCAAACCATCCACAGATGGCTGGTGCAAAAGGATCTTCATGTGCAATACCTGGTTGTGATGCTAAGGTGATGAGGGATGAACGCGGTGTGGATATTCTTCCATGTGAGTGTGATTTCAAGATATGTAGAGACTGCTACATAGATGCAGTGAAAATAGGTGGTGGTATATGTCCAGGGTGCAAGGAACCATACAAGAACACAGAGCTAGATGAAGTGGCAGTGGATAATGGAAGGCCTCTTCCACTTCCACCGCCGAACCGGGTGTCTAAGATGGAGAGGAGATTGTCATTGATGAAGTCAACAAAGTCAGCTCTGATGAGAAGCCAAACTGGTGATTTTGATCACAACAGGTGGCTCTTTGAGACAACAGGTACCTATGGCTATGGCAATGCTATATGGCCAAAGGAAGGGAATTTCGGAAATGGAAATGGAGATGACAATAGTGTTGCTGATCCTTCTGAGTTGATGAACAGACCTTGGAGACCACTTACAAGGAAACTCAAGATACCTGCTGCTATTCTGAGTCCATATCGTCTCATCATTTTTGTAAGATTGGCAGTGTTAGTACTATTCTTGATGTGGAGGGTGACACACCCAAATAAAGAGGCAATCTGGCTATGGGGAATGTCTGTGGTTTGTGAGATATGGTTTGCATTCTCTTGGCTCCTTGATCAATTGCCAAAGCTATGTCCAGTGAATCGTTCCACCGATCTTAATGTTCTTAAGGAAAAATTTGAAACACCAACTCCTGACAATCCTACTGGAAAATCTGATCTTCCAGGCATAGATATTTTTGTCTCTACTGCAGATCCTGAAAAAGAACCACCTCTTGTAACTGCAAACACCATCTTGTCTATTCTAGCTACTGATTACCCTGTTGAGAAGCTTTCTTGCTATGTTTCCGACGATGGTGGAGCTCTTCTAACTTTCGAGGCAATGGCTGAAGCTGCTAGCTTTGCTAATGTATGGGTTCCTTTCTGCCGGAAACATGACATTGAGCCGAGAAATCCTGAATCATATTTCAACTTGAAGAGAGACCCTTACAAGAACAAAGTCAGGCCGGATTTCGTGAAGGACCGTAGGCGTGTGAAGCGCGAGTATGATGAGTTCAAAGTTAGGATCAATGGCCTGCCTGACTCAATTCGTCGCCGGTCCGATGCATTTCATGCAAGGGAAGAAATCAAGGCCATGAAACTTCAGAGACAGAACAGGGAAGATGAACCTGTGGAGCCTGTAAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCACTGGCCAGGAACTTGGTTGAATTCTGCACCTGAACACTCCAGGGGTGACCATGCTGGTATAATTCAGATGATGTTGAAACCTCCAAGTGATGAACCTCTTCTAGGAACCAGTGATGATTCAAATCTCATTGACATGACCGACGTGGATATCCGTCTTCCCCTTCTTGTTTACGTTTCCAGAGAGAAACGTCCGGGCTATGATCACAACAAGAAAGCTGGAGCCATGAACGCCTTGGTTCGAGCCTCGGCAATCATGTCCAATGGACCTTTCATACTCAACCTTGACTGTGATCACTATGTCTATAACTCAAAGGCCATGAGGGAAGGTATGTGCTTCATGATGGATCGAGGAGGCGACCGCCTTTGCTACGTCCAGTTCCCACAACGGTTCGAGGGGATTGACCCCTCAGATAGATATGCGAATCACAATACTGTATTCTTTGATGTCAACATGAGAGCCCTTGATGGACTTCAAGGGCCAGTTTATGTAGGAACCGGTTGTCTATTCAGAAGGGTAGCCCTCTATGGTTTCGATCCACCTCGCTCCAAAGAACATAACTTGGGTTCAGGCTGCTGTAGTTGCTGCCTCGGCCGGAGGCAAAAGAAGAGCACCCCTGAAGAGAACAGAGCACTAAGAATGGGTGATTCTGATCATGAAGAAGAAATGAACCTTTCCTTGTTCCCAAAGAAATTTGGAAACTCAACTTTCCTCATTGATTCAATTCCAGTGGCAGAGTTCCAAGGCAGGCCACTTGCTGACCACCCTGCAGTCAAGAATGGCCGTCCTCCGGGTGCTCTCACTGTCCCCCGGGAGCTTCTCGACGCATCGACCGTCGCCGAGGCCATCAGTGTTATCTCCTGCTGGTATGAGGAGAAGACTGAATGGGGACACCGTGTAGGGTGGATCTACGGATCAGTGACTGAGGATGTTGTCACCGGCTATAGGATGCACAACAGAGGCTGGAAATCCGTTTACTGTGTGACGAAACGCGACGCATTCCGGGGAACTGCTCCGATCAACCTCACGGACAGACTCCATCAGGTTCTCCGGTGGGCTACTGGTTCAGTGGAAATATTCTTCTCAAGAAACAACGCCATTCTTGCAAGCTCAAGAATGAAGCTTCTTCAGCGAATTGCATACCTTAACGTCGGAATCTATCCCTTCACTTCCATATTCCTTATTGTCTACTGCTTTCTTCCGGCACTCTCCCTCTTCTCCGGCCAGTTCATCGTTCAAACCCTCAGCGTCACCTTCCTCGTTTATCTCTTAACAATCACGGTCACTTTATGCATGCTTGCAATTCTGGAGATCAAGTGGTCCGGCATTGAGCTAGAAGAATGGTGGCGAAACGAACAGTTCTGGCTAATCGGCGGAACAAGCGCCCACCTGGCGGCGGTTCTACAAGGCCTGCTAAAAGTGATAGCAGGAATAGAGATCTCATTCACATTAACCTCCAAGTCCGGCGGCGACGACGTAGACGACGAGTTTGCCGATCTATACATTGTGAAATGGACATCACTTATGTTGCCACCAATCACAATAATGATGGTGAACTTGATAGCAATAGCGGTTGGTGTAAGCAGGACTATTTACAGTGCGATACCTCAATGGAGCAAGTTGCTAGGTGGAGTTTTCTTCAGCTTTTGGGTGTTGACTCATTTATACCCTTTTGCAAAAGGGTTGATGGGAAGAAGAGGGAGAACACCTACCATTGTTTTTGTGTGGTCTGGTCTTATTGCTATCACAATTTCACTCCTTTGGGTCGCTATTAATCCACCTCAAGGTTCCAACCAAATTGGTGGTTCCTTTCAGTTCCCATAG 5037 0.4527 MDKSIFIEQAHSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTATTAETSFVASLDHFLANKSPSTKDDTASPDADITPLDDAASRSEADRLYSDPYYPVGLPLRVYVYDMPKKFTYDLLWLFQNTYKDTSNLTSNGSPVHRLIEQHSIDYWLWADLIAPPSERLLRSVVRVHRQEEADLFYVPFFTTISFFLMEKQQCKALYREALKWMTDQPAWKRSDGRDHILPIHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVYLEKDLILPYVPNVELCDARCLSETNPKRSTLLFFRGRLKRNAGGKIRSKLGAELSGADDVVIQEGTAGEGGKEAAQNGMRKSLFCLSPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSVDAVKPGWLLNFLKGISAARIKEMQQNLSKYSRHFLYSSPAQPLGPEDLVWRMMAGKVVNIKLHSRRSQRVVQGSRNVCTCECRPGNSSEFVGLLRNCKRKRWDLILEVQSLSSNMASKQFKGSRSSLSATSDAPENQKPPLPPTITFGRRTSSGRYISYSRDDLDSELGSNDFMNYTVHLPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTQAHLMDKVIESEANHPQMAGAKGSSCAIPGCDAKVMRDERGVDILPCECDFKICRDCYIDAVKIGGGICPGCKEPYKNTELDEVAVDNGRPLPLPPPNRVSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETTGTYGYGNAIWPKEGNFGNGNGDDNSVADPSELMNRPWRPLTRKLKIPAAILSPYRLIIFVRLAVLVLFLMWRVTHPNKEAIWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPTPDNPTGKSDLPGIDIFVSTADPEKEPPLVTANTILSILATDYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFHAREEIKAMKLQRQNREDEPVEPVKIPKATWMADGTHWPGTWLNSAPEHSRGDHAGIIQMMLKPPSDEPLLGTSDDSNLIDMTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYVYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHNLGSGCCSCCLGRRQKKSTPEENRALRMGDSDHEEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTVPRELLDASTVAEAISVISCWYEEKTEWGHRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAILASSRMKLLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLSVTFLVYLLTITVTLCMLAILEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMLPPITIMMVNLIAIAVGVSRTIYSAIPQWSKLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPQGSNQIGGSFQFP 1678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01172 1678 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 568 1676 - -
Aip03g01172 1678 SUPERFAMILY Nucleotide-diphospho-sugar transferases 924 1472 IPR029044 -
Aip03g01172 1678 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1115 1250 IPR029044 -
Aip03g01172 1678 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 568 1676 - -
Aip03g01172 1678 SUPERFAMILY RING/U-box 646 715 - -
Aip03g01172 1678 MobiDBLite consensus disorder prediction 537 572 - -
Aip03g01172 1678 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 644 725 IPR013083 -
Aip03g01172 1678 MobiDBLite consensus disorder prediction 537 555 - -
Aip03g01172 1678 Pfam RING/Ubox like zinc-binding domain 663 712 - -
Aip03g01172 1678 Pfam Cellulose synthase 909 1667 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aip03g01172 1678 Pfam Exostosin family 124 430 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01172 Aip-Chr3 11608868 11618875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01172 536 1678 Glycosyltransferase AT3G03050 83.885 0.0 2034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01172 K20924 - gmx:100792604 2153.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g01172 03 11608868 11618875 Aip05g01234 05 18064410 18069082 ECH
Aip03g01172 03 11608868 11618875 Aip03g01172 03 11608868 11618875 ECH