Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip03g00421 | ATGGCTACACCAACAGTGCAGCAGGAAGCTGCGGCTGTGGCCGCTACTCCAAGGAAGAAAATGACCAAGCAATTGACCGGGAAGCGCGACGACACGACCCTGCACTCGGCAGCGAGAGCAGGGAACTTGGCTCTCATAAAGGACACACTTAGTGGTGCTGAAGAGGGTCAACTTCATGAGTTGTTGGCAAAGCAGAACCAAGCTGGGGAAACAGCCCTTTATGTTGCTGCTGAGTATGGTTATGTTGATTTGGTTAAGGAGATGATTCGGTATTATGATCTCGCTGATGCCGGAATCAAGGCTAGGAATGGTTTTGATGCACTCCACATTGCTGCTAAACAAGGGGATCTAGATGTGTTGAAGATCCTTATGGAGGCTCATCCTGAATTATCAATGACCGTGGATCCCTCGAACACCACGGCTTTGCACACAGCCTCGACACAAGGGCATACTGAGATAGTGAAGTTTCTATTAGAGGCAGGTAGTAGCTTGGCAACCATAGCTAGAAGCAATGGGAAAACAGCTCTGCATTCTGCAGCAAGAAACGGACATTTGGCTGTTGTAAAGGCACTTTTAGAGAAGGAGCCTGGGGTTGTGACACGGACCGATAAGAAGGGCCAGACCGCACTTCACATGGCGGTGAAAGGGCAGAATCTTGAGGTGGTGGAGGAGTTGATAAAAGGGGATCCCTCATCAGTAAACATGATTGATAATAAGGGTAATACGGCTTTGCATATTGCAACCCGGAAGGGTAGAGCTCAGATTGTGAAGTTGCTTCTTGGACAAAAAGAAACAGACACCACAGCAGTTAATAAATCCGGCGAAAGTGCATTAGACACTGCTGAGAAAACTGGGAACTCCGAAATCAAAGCCATACTTTCGGAACACGGTGTTCAAAGTGCCAAAGCCATGAAGCCAAAGCCAACAACAGCAGCTAGAGAGTTGAAACAAACAGTGAGTGACATAAAGCATGAAGTCCATTATCAATTAGAACACACGCGCCAGACCAGAAAGCGCGTCCAGGGAATCGCCAAGCGCATCAACAAGATGCATGCTGAAGGACTCAACAATGCAATCAACTCAACCACTGTGGTTGCTGTCCTCATTGCCACAGTTGCCTTTGCAGCTATCTTCACAGTTCCTGGCCAATTTGTTGATGATCCAAAAAACATTCCTAAAGGGATGTCCCTTGGGGAAGCAAACATAGCCCCTACGGCTGCATTCATCATTTTCATTGTCTTCGATTCCATTGCGCTGTTCATCTCCCTAGCCGTCGTGGTGGTGCAGACCTCGATCGTGGTCATAGAGAGCAAAGCTAAGAAGCAGATGATGGCTATCATTAACAAGCTAATGTGGCTGGCTTGTGTGCTTATCACTGTGGCATTCTTGGCACTTTCATTCATAGTTGTTGGAAAAGATCAAAAGTGGCTTGCAATTGGAGTCACAGTTATAGGAACAACTATAATGGCTACAACATTAGGATTAATGTGTTACTGGGTCATTAGGCACAGAATTGAGGCATCAAATTTGAGAAGCATAAGGAAGTCTTCAATGGGAAGCAGGTCAAGATCATTTTCAGTTTCTGTTATGTCAGATACTGAGATACTAAACAATGAGTATAAAAAAATGTATGCGATTTAG | 1641 | 0.4583 | MATPTVQQEAAAVAATPRKKMTKQLTGKRDDTTLHSAARAGNLALIKDTLSGAEEGQLHELLAKQNQAGETALYVAAEYGYVDLVKEMIRYYDLADAGIKARNGFDALHIAAKQGDLDVLKILMEAHPELSMTVDPSNTTALHTASTQGHTEIVKFLLEAGSSLATIARSNGKTALHSAARNGHLAVVKALLEKEPGVVTRTDKKGQTALHMAVKGQNLEVVEELIKGDPSSVNMIDNKGNTALHIATRKGRAQIVKLLLGQKETDTTAVNKSGESALDTAEKTGNSEIKAILSEHGVQSAKAMKPKPTTAARELKQTVSDIKHEVHYQLEHTRQTRKRVQGIAKRINKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFVDDPKNIPKGMSLGEANIAPTAAFIIFIVFDSIALFISLAVVVVQTSIVVIESKAKKQMMAIINKLMWLACVLITVAFLALSFIVVGKDQKWLAIGVTVIGTTIMATTLGLMCYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDTEILNNEYKKMYAI | 546 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat region circular profile. | 137 | 164 | - | - | |
| Aip03g00421 | 546 | PANTHER | ANKYRIN REPEAT PLANT PROTEIN | 9 | 546 | - | - | |
| Aip03g00421 | 546 | SUPERFAMILY | Ankyrin repeat | 33 | 298 | IPR036770 | - | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat profile. | 137 | 169 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat region circular profile. | 171 | 194 | - | - | |
| Aip03g00421 | 546 | Gene3D | - | 167 | 352 | IPR036770 | - | |
| Aip03g00421 | 546 | PANTHER | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT | 9 | 546 | - | - | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat profile. | 205 | 227 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat region circular profile. | 103 | 125 | - | - | |
| Aip03g00421 | 546 | Pfam | Domain of unknown function | 353 | 469 | IPR026961 | - | |
| Aip03g00421 | 546 | Gene3D | - | 7 | 166 | IPR036770 | - | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat region circular profile. | 239 | 260 | - | - | |
| Aip03g00421 | 546 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat profile. | 239 | 260 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | Pfam | Ankyrin repeats (3 copies) | 171 | 229 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | Pfam | Ankyrin repeats (3 copies) | 98 | 164 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | Pfam | Ankyrin repeats (3 copies) | 237 | 298 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | Pfam | Ankyrin repeats (3 copies) | 20 | 91 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat profile. | 103 | 135 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat profile. | 171 | 203 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | ProSiteProfiles | Ankyrin repeat region circular profile. | 205 | 227 | - | - | |
| Aip03g00421 | 546 | SMART | ANK_2a | 171 | 201 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | SMART | ANK_2a | 239 | 269 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | SMART | ANK_2a | 137 | 166 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | SMART | ANK_2a | 205 | 235 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | SMART | ANK_2a | 103 | 132 | IPR002110 | GO:0005515 | |
| Aip03g00421 | 546 | SMART | ANK_2a | 68 | 97 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aip03g00421 | Aip-Chr3 | 4133110 | 4136295 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip03g00421 | 7 | 546 | Miscellaneous Gene Families | AT1G07710 | 73.333 | 0.0 | 772 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip03g00421 | - | - | gmx:100791519 | 853.973 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip03g00421 | 03 | 4133110 | 4136295 | Aip03g00421 | 03 | 4133110 | 4136295 | ECH | |
| Aip08g00453 | 08 | 3485215 | 3487637 | Aip03g00421 | 03 | 4133110 | 4136295 | ECH |