Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00387 ATGGGGAGAAACATAGGATCCCTGTTGCTGTTGGCTCTTGTTATTGTTGTTCATCATGGAGTTGTTGTGGCCACACCCAAATCAATGGAGCTCTACAAGGATCAGGATGAAGAATATTGGGATGAGAGACGACCTTCTTCTTCTTCTTCAGATTCAGGGTTTTTGTTGCAAGATGCAAAGAGTGTGGTGAAGACTGAAGCTGGGGAGATGAGAGTGATGAGAAGCTATGATAGTGGTTTTGGTGGTGGCAGAAGGAGTTTCGAGAGGCTCATGCACATTGCATTCATCACCATGGAACCAAGGTCCTTGTTCATTCCTCAGTACCTTGACTCTAATTTGGTCATCTTCATCCGAAGAGGGGAAGTAAAATTGGGATACATGAATGGAGATGAACTAGCAGAGAGAAGATTAAAGAGTGGGGATATATATGTAATTCCAGCAGGATCTCCATTCTATTTTCTCAACATTGGTCAAGGTCAGAGACTTCACATGGTTTGCAGTATTACCCCAGTTCAAGGAACACCCACACCTACCTTCCATTCCTTCTATATTGGTGGTGGTGCCAATCCAGAGTCTATTCTTTTTGGATTTGACCCTGAGATCCTTCAAACTGCATTCAATGCAACAAGAAGGGAACTAGATAGAGTTTTCAGTGCAGAATTAGAAGGACCAATAGTGTTTGTTGGTGATATTCGTGAGCCTAGTTTGTGGACCAAGTTCCTTCAAATGAAGGACCAAGACAAAGCCCAACACTTGAAGAAAATGGTGGTACAAGAACAAGAAGAACATGATGATCATGATCGTGATCATTATGATGAGAAAGAAGAAGATGAAAGGACAAGTTGGTCATGGAGAAAGCTATTGACCAGGATCTTGGGAAATGAGAGCAAGAAGAAAACAGATTACAAGGGCAGCACTGGTGGTTCTCCTGATTCATACAACCTCTATGACAAGAAACCAGATTTCAGAAACAGTTATGGTCATAGCAGTGCTCTTGATGGTGACGAATATCATCCACTCCGAGATGTTAACATCGGCGTTTTCCATGTCAACCTCACTGCGGGATCGATGATGGCTCCTCACGTGAATCCAAGAGCAACAGAATATGGAATCATACTTCGAGGTTCCGGCAGAATCCAAGTGGGGTTTCCAAATGGCACCAATGCTATGAACGCTGAGGTTCGAGTAGGTGACGTGTTCTTTGTCCCTAGATTCTTCCCTTTCTGCCAAATATCGTCAAGGACGGGTCCTTTGGAATTCGTGGGGTTTGCCGATTCTGCCAAAAAGAACTATCCGCAATTTCTGGCAGGATCGGTGTCCCTCGTGAGATCTATGATGGGTCCTGAGCTCGCCGCGGCTTTTGGTGTCCAAGAGGATACCATGCACCGTCTCGGCGATGCTCAGCGCGAGGCCATCATATTGCCTTCCACGTGGGTTCCCGTTGGTGGTGACAAGGAGAAAGGCAAAGAGCCACGTGGCGGAGACAGTCGGGAGAGAGAAAAAGAGCAACGTGGCAGAGATCCCGAGGAGAGTGAGAGAGAAGCTGGTGGTGACGAGGAAAAAGAAAAAGGCAAAGAGTCACGTGGCAGAGATCCTGAGGAGAGGGAGAGAGAAAGGAAGCCGCGTGATGGTGGTGCAGAGGAGAGGGAGAAGGTGCCACGTGGCCGAGGTGGTGATGTGGAAGGGAGGGAGAGTGTGCCACGTGGTAGGGATGTGAAGAGGGAGCCAAGGCCAAAAGCGGAGGAGGAAAGAGGTCCTACTGGGAAGGATTTGGCTAAGAATTTAGTTATGGGGACTTGTATAATGAATTCAACCAACATATTCGTTTTCTTCACTCACAGCCTATCTCAATGA 1854 0.4671 MGRNIGSLLLLALVIVVHHGVVVATPKSMELYKDQDEEYWDERRPSSSSSDSGFLLQDAKSVVKTEAGEMRVMRSYDSGFGGGRRSFERLMHIAFITMEPRSLFIPQYLDSNLVIFIRRGEVKLGYMNGDELAERRLKSGDIYVIPAGSPFYFLNIGQGQRLHMVCSITPVQGTPTPTFHSFYIGGGANPESILFGFDPEILQTAFNATRRELDRVFSAELEGPIVFVGDIREPSLWTKFLQMKDQDKAQHLKKMVVQEQEEHDDHDRDHYDEKEEDERTSWSWRKLLTRILGNESKKKTDYKGSTGGSPDSYNLYDKKPDFRNSYGHSSALDGDEYHPLRDVNIGVFHVNLTAGSMMAPHVNPRATEYGIILRGSGRIQVGFPNGTNAMNAEVRVGDVFFVPRFFPFCQISSRTGPLEFVGFADSAKKNYPQFLAGSVSLVRSMMGPELAAAFGVQEDTMHRLGDAQREAIILPSTWVPVGGDKEKGKEPRGGDSREREKEQRGRDPEESEREAGGDEEKEKGKESRGRDPEERERERKPRDGGAEEREKVPRGRGGDVEGRESVPRGRDVKREPRPKAEEERGPTGKDLAKNLVMGTCIMNSTNIFVFFTHSLSQ 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00387 617 Gene3D Jelly Rolls 305 477 IPR014710 -
Aip03g00387 617 CDD cupin_7S_vicilin-like_C 320 471 - -
Aip03g00387 617 CDD cupin_7S_vicilin-like_N 62 235 - -
Aip03g00387 617 Gene3D Jelly Rolls 48 240 IPR014710 -
Aip03g00387 617 MobiDBLite consensus disorder prediction 483 589 - -
Aip03g00387 617 PANTHER OS03G0336100 PROTEIN-RELATED 9 479 - -
Aip03g00387 617 MobiDBLite consensus disorder prediction 475 591 - -
Aip03g00387 617 SUPERFAMILY RmlC-like cupins 61 470 IPR011051 -
Aip03g00387 617 PANTHER OS03G0336100 PROTEIN 9 479 - -
Aip03g00387 617 Pfam Cupin 313 460 IPR006045 -
Aip03g00387 617 Pfam Cupin 91 174 IPR006045 -
Aip03g00387 617 MobiDBLite consensus disorder prediction 257 276 - -
Aip03g00387 617 SMART Cupin_1_3 52 214 IPR006045 -
Aip03g00387 617 SMART Cupin_1_3 313 462 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00387 Aip-Chr3 3693421 3696923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00387 61 474 Miscellaneous Gene Families AT2G18540 28.605 1.28e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00387 - - aip:107629183 1107.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00387 03 3693421 3696923 Aip03g00387 03 3693421 3696923 ECH
Aip08g00491 08 3930049 3932236 Aip03g00387 03 3693421 3696923 PCT