Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00349 ATGGACTACTCAATCTCTTCCGCCTCCGACCACGACGCCCATACTCCGCCGCATCAGGATTCTTCCAACCCTGAAACCTCCGCAAACGGCGGAACCATCACTGTTCAGCTGTTCGTGGAGGAAGGTGAGGTTGAACCGGGAGAGGTCCGAGTCACTATCGAACCCGGTTCAGACGCCGCTGCTGCGTCTTCCTCGGGGAGGAGGGCCGGTTTGGAGGTCGAACCGGAAGCTCCATCGAGCCCTAGCAGCAGCGGTTACGTCGGCGAGAGAGGAAGCAGCAGCAGCAGCGACACCAGCGGTTCGCCAATTATACCGATCGCGCGCGAAATTGAAGAGGAGATGAGTAGGGAAGTTGATGATATCACACTCCATGGATTCTCCGACGCCCAAACGGCGTGGATTCCTGGAAAACGACATGTCGATGAGGATGATGCTTCCATTTCTTGGAGAAAAAGGAAGAAGCATTTCTTTGTTCTCAGTCATTCTGGCAAGCCAATATACTCTAGGTATGGAGATGAGTATAAGCTTGCAGGATTTTCAGCGACTTTGCAGGCAATCATTTCCTTTGTAGAGAGCAGGGGTGATTCTGTGAAATGGGTGAGGGCTGGAAAGCATCAGGTTGTTTTTCTTGTGAAAGGGCCAATTTATTTGGTCAGCATCAGCTGTACAGAAGAACCTTATGAGTCATTAAGGGGGCAGTTGGAGCTAATTTATGGTCAGATACTTGTTATACTAACAAAATCAGTAAACAGATGCTTCGAGAAGAACCCAAAGTTTGATATGACACCCTTGCTCGGTGGAACAGACATTGTCTTTTCCTCTCTAATCCATTCCTTCAGTTGGAATCCTGCTACATTTCTTCATGCCTATACTTGTCTTCCTCTAGCATATGCAACAAGGCAAGCTGCAGGTGCTATCTTGCAAGACATTGCCGATTCAGGTGTTTTGTTTGCAATTCTGATGTGCCGGCACAAGGTAATCAGTCTTGTTGGTGCTCAGAAAGCTTCCCTTCATCCAGATGATATGCTGCTGCTGGCCAACTTTGTTATGTCATCAGAATCCTTTAGGACATCAGAGTCGTTTTCTCCCGTTTGCCTTCCAAGATATAATCCTTCAGCATTTTTGTACGCTTATATCCATTATTTTGATGCTGACACATACTTGATGCTGCTAACCACTAGTTCAGATGCATTTTATCATCTTAAAGATTGCAGGGTTCGTGTTGAATTGGTCCTTTTGAAGTCAAATGTTCTTAGTGAAGTTCAGAGATCTTTGCTGGATGGGGGAATGCATGTTGGGGATCTTCCACCCATAGCTCAGTCTGGTTCATCTCAGTTGGGCCCGCACAGGCTTCCATCTGATTCTCCTGAAAGATTCCTGGAACCTAATTCCGCCATTGACTGTCCTGCAGGGTTGTGGCATTTTATATACTTTAGTATATATCTGGATCAATATGTCTCTTCAGAGTTTCCACCATCCATTAAAACACCTCAGCAGCAAAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGATAATGGTATTGGACTGCACAAAACTCAATTTCGGAGAGATGAAAACTACGTTCTTCTCTGTTGGGTGACACAAGATTTTGAGCTGTATGCTGCCTTTGATCCCCTTGCGGACAAGGCATCGGCAATAAAGACATGCAACCGTGTTGTTCAATGGATAAAAGATGTGGAAAATGAAATTTTTTTGCTAGGAGCGAGCCCCTTTTCATGGTGA 1758 0.4585 MDYSISSASDHDAHTPPHQDSSNPETSANGGTITVQLFVEEGEVEPGEVRVTIEPGSDAAAASSSGRRAGLEVEPEAPSSPSSSGYVGERGSSSSSDTSGSPIIPIAREIEEEMSREVDDITLHGFSDAQTAWIPGKRHVDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEYKLAGFSATLQAIISFVESRGDSVKWVRAGKHQVVFLVKGPIYLVSISCTEEPYESLRGQLELIYGQILVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDIADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSESFSPVCLPRYNPSAFLYAYIHYFDADTYLMLLTTSSDAFYHLKDCRVRVELVLLKSNVLSEVQRSLLDGGMHVGDLPPIAQSGSSQLGPHRLPSDSPERFLEPNSAIDCPAGLWHFIYFSIYLDQYVSSEFPPSIKTPQQQKRLYRAYQKLFASMHDNGIGLHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKASAIKTCNRVVQWIKDVENEIFLLGASPFSW 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00349 585 Pfam Third Longin domain of FUZ, MON1 and HPS1 471 572 IPR043970 GO:0016192
Aip03g00349 585 MobiDBLite consensus disorder prediction 77 102 - -
Aip03g00349 585 Pfam Second Longin domain of FUZ, MON1 and HPS1 315 408 IPR043971 GO:0016192
Aip03g00349 585 MobiDBLite consensus disorder prediction 19 34 - -
Aip03g00349 585 MobiDBLite consensus disorder prediction 1 102 - -
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 154 171 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 172 192 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 206 220 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 257 269 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 286 307 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 310 323 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 334 350 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 359 382 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 387 413 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 534 548 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 550 563 IPR004353 GO:0006623
Aip03g00349 585 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 563 583 IPR004353 GO:0006623
Aip03g00349 585 PANTHER BNAC04G15860D PROTEIN 44 585 - -
Aip03g00349 585 Pfam First Longin domain of FUZ, MON1 and HPS1 154 274 IPR043972 GO:0016192
Aip03g00349 585 PANTHER SAND PROTEIN-RELATED 44 585 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00349 Aip-Chr3 3401831 3405879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00349 K20195 - gmx:100814534 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00349 03 3401831 3405879 Aip03g00349 03 3401831 3405879 ECH
Aip08g00518 08 4192743 4197397 Aip03g00349 03 3401831 3405879 PCT