Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00003 ATGTCAATTGCACCAAGGGACTCTCATGAAGCACAAGTGCAATTTGCTTTAGAAAGAGGTGTTCCGGCTATCATTGGCGTTCTTGGAACCATCATGTTGCCTTTCCCTTCTGGATCATTTGACATGGCACATTGTTCTCGCTGTTTGATTCCATGGGGTGGAAATGATGGTATATATATGAAGGAGGTTGATCGAGTTCTTAGACCTGGTGGTTACTGGATCCTTTCTGGCCCTCCAATCAGCTGGAGGAATAGCTACCGAGCATGGCAGCGTCCTGAAGATGAGCTTGAGGAGGAGCAAAGGCAGATTGAGGATATTGCTAAACTTCTTTGTTGGGAAAAGAGACATGAGAAGGGTGAAATCGCTATATGGAGAAAAAGATTAAATACTGATGAATGCACTGAACAAGAAGCTCAATCTTCAACATGTGATGCTACAAATGCCAGTGATGTCTGGTACAAAAAGATGGAAAATTGTATAACTCCTACTAAAACTAATGGTTCGTGGAAGCCATTCCCAGAGAGACTCAATGCTATTCCTTCCAGAATAACAAGTGGATCTGTTCCTGGTCTATCTGTAGAGATATTTGAGGATGATAATCGATCATGGAAGAAGCATGTAAACGCTTATAAGCGGGTCAACAAAATCATTGACTCGGGAAGGTATCGCAACATAATGGACATGAATGCTGGTCTGGGGAGTTTTGCTGCTGCCATGGACTCTCCGAAATTATGGGTTATGAATGTTGTGCCTACAATCGCAGAGAAAGCTAACCTTGGTGTTATATTTGAGCGTGGATTGATTGGCATTTATCACGATTGGTGCGAAGCCTTCTCCACATATCCCAGGACCTATGACCTAATCCATGCAAATGCTGTTTTCAGCTTATACAAGAATGAGTGCGGCGCAGAAGACATTTTATTGGAGATGGATCGTATATTACGGCCTGAAGGAGCTGTAATAATTCGAGATGATGTTGGCGTGCTAATGCGGGTGAAGAGAATTGTGAGAGGAATGAGGTGGAAAACGAGAATGGTGGATAACGAGGATGGTCCATTGGTTTCAGAGAAGGTTTTGTTTGCAGTCAAGCGGTATTGGGTTGCAGGTGACAACAGTACAAGCTCACTGTGA 1131 0.4341 MSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGSFDMAHCSRCLIPWGGNDGIYMKEVDRVLRPGGYWILSGPPISWRNSYRAWQRPEDELEEEQRQIEDIAKLLCWEKRHEKGEIAIWRKRLNTDECTEQEAQSSTCDATNASDVWYKKMENCITPTKTNGSWKPFPERLNAIPSRITSGSVPGLSVEIFEDDNRSWKKHVNAYKRVNKIIDSGRYRNIMDMNAGLGSFAAAMDSPKLWVMNVVPTIAEKANLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHANAVFSLYKNECGAEDILLEMDRILRPEGAVIIRDDVGVLMRVKRIVRGMRWKTRMVDNEDGPLVSEKVLFAVKRYWVAGDNSTSSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00003 376 PANTHER METHYLTRANSFERASE PMT18-RELATED 1 372 - -
Aip03g00003 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 7 101 IPR029063 -
Aip03g00003 376 Gene3D Vaccinia Virus protein VP39 6 158 IPR029063 -
Aip03g00003 376 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 372 IPR004159 GO:0008168
Aip03g00003 376 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 1 363 IPR004159 GO:0008168
Aip03g00003 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 202 330 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00003 Aip-Chr3 43654 46588 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00003 - - gmx:100807547 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02095 01 113524048 113526330 Aip03g00003 03 43654 46588 ECH
Aip03g00003 03 43654 46588 Aip03g00003 03 43654 46588 ECH