Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02095 ATGTTAACAAAGGGCAAAGTACAAGGAGGAGACACCATTAAAAAGAATTGTTCATTAACTTCAGTTTTGATTGTAGTTGGATTGTGCGGTTTCTTCTACGTAGTTGGTTTATGGCAACGAAGCGGTTTTGGAAAGGGAGATAGAATAGCCATTGGAGTTATCAAAAGAACAGAGTGCATTACTCTCTCTGATCTCATGTATGACACTCCCAACAATCACAATGATGGTGATCATATCAAGGAATACAACTACAAGCCGTGTGATGCAAGCTTCATCGATCACACGCCGTGTCACCGGTATGCAACACCGTACCAGTGGCCCAAGAATAGAGGAGGAACACGGTTTCCTCAAGAACTTGATGCATACATTGATGAACTTTCATCTGTTATACCCTTCCACACGGGAATGATTAGAACTGCATTGGATACTGAGTGTAGGGTTGCTAGTTTTGGTGCATACATGTTTAAGAAAAATGTAATTACTATGTCAATTGGAGGACATGAATCTCAAGTGCAATACGCAATGGAAAGAGGTGTTCCTGCTATCATTGGCGTTCTTGCAACCATGAAGCTGCCTTTCCCTTCAGGATCTTTTGACATGGCACATTGTTCTCACTGTCTCATTCCATGGGACACAGAAGATGGAATGTACATGATGGAGGTTGACCGAGTTCTCAGGCCTGGTGGTTACTGGATACTTTCCGGTCCACCTATCAATTGGAAGAATAACTACCAAGAATTGCAGCGTTCCCAACTGGAACTTGAGAAGGAGCAAAGGAACATTGAAGATATTGCCAAACTTCTTTGCTGGGAAAAGAAATATGAAAAGGGTGACATTGCCATATGGAGAAAAAGATTAAATTGCAGCCAACAAGACACTCCACCCACGGCGGCAGCAGTATGCAAATCCACCCATGCTGATCATGTCTGGTACAAGAAGATGGAAAAGTGTGTAACTCCTAGCCCCGGACCAAGCCGTTCATGGAAACCATTCCCAGAGAGGCTCAACGCCATTCCATCAAGAGTAAGCAGAGAATATGTGGAGGTATACAAGGAGGACAACCGATTGTGGAAGAAGCATGTAAATGCTTACAAGAGGGTCAACAAAATCATTGACTCAGGAAGGTATCGCAACATCATGGACATGAATGCTGGTCTGGGAAGTTTTGCTGCAGCTCTGAATTCAACCAAATTGTGGGTTATGAATGTTGTGCCTACCATTTCTCAAAAAGCTTCTCTTGATGTTATCTTGGAGCGTGGATTGATCGGCATTTATCATGATTGGTGTGAAGCATTTTCCACATATCCAAGAACATATGATCTGATCCACGCAAATGGTGTTTTCAGTTTGTACAAGAATGTATGTAGTGCAGAAGAGATGCTACTGGAGATGGACCGGATTCTGCGGCCGGAAGGAGCAGTGATATTGAGAGATGAAGAGAATGTGTTGAGGAAGGTTCAGAGAATAGTGAGGGGAATGAGATGGAAGACCAAAATGGTGGATCACGAGGATGGTCCACTTGAGCAAGAGAAGCTTTTGTTTGCTGTCAAGCAGTATTGGGTTGAAGGTGACACCAACATCACCACCACATGA 1593 0.4338 MLTKGKVQGGDTIKKNCSLTSVLIVVGLCGFFYVVGLWQRSGFGKGDRIAIGVIKRTECITLSDLMYDTPNNHNDGDHIKEYNYKPCDASFIDHTPCHRYATPYQWPKNRGGTRFPQELDAYIDELSSVIPFHTGMIRTALDTECRVASFGAYMFKKNVITMSIGGHESQVQYAMERGVPAIIGVLATMKLPFPSGSFDMAHCSHCLIPWDTEDGMYMMEVDRVLRPGGYWILSGPPINWKNNYQELQRSQLELEKEQRNIEDIAKLLCWEKKYEKGDIAIWRKRLNCSQQDTPPTAAAVCKSTHADHVWYKKMEKCVTPSPGPSRSWKPFPERLNAIPSRVSREYVEVYKEDNRLWKKHVNAYKRVNKIIDSGRYRNIMDMNAGLGSFAAALNSTKLWVMNVVPTISQKASLDVILERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKNVCSAEEMLLEMDRILRPEGAVILRDEENVLRKVQRIVRGMRWKTKMVDHEDGPLEQEKLLFAVKQYWVEGDTNITTT 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02095 530 Gene3D Vaccinia Virus protein VP39 149 285 IPR029063 -
Aip01g02095 530 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 14 108 IPR004159 GO:0008168
Aip01g02095 530 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 110 524 IPR004159 GO:0008168
Aip01g02095 530 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 249 IPR029063 -
Aip01g02095 530 Gene3D Vaccinia Virus protein VP39 333 518 IPR029063 -
Aip01g02095 530 PANTHER METHYLTRANSFERASE PMT2-RELATED 14 108 - -
Aip01g02095 530 PANTHER METHYLTRANSFERASE PMT2-RELATED 110 524 - -
Aip01g02095 530 Coils Coil 244 267 - -
Aip01g02095 530 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 110 517 IPR004159 GO:0008168
Aip01g02095 530 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 360 512 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02095 Aip-Chr1 113524048 113526330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02095 - - ahf:112710313 1087.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02095 01 113524048 113526330 Aip03g00003 03 43654 46588 ECH
Aip01g02095 01 113524048 113526330 Aip01g02095 01 113524048 113526330 ECH