Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02978 ATGTCGGATTCACCAAGCAAGAACCCTCCTACAACCGAAGTGGACCTTGGTTTTGAGAAGGTTCCTGAGAAGATTGAAGAAGATGGAAAAGTTGCAGGTCCCATGCTCCATTGTGGTAATTGTGATACAGAAGTAGTTCACAAGCTGGCTGAAATGTTCCTTCCAGGATTGGCTTGTGCCTGCGTCGATAACACGACCGGATATCCCTTCTCCACACCTGGTTCAGTGGCAGGTAATTTCAGAAAGGAAATGATAGATTATCTCACACAAAGAAGTGAATCATTTGTAGCTGAGTCTGTTATCTTAGAAGGTGATCCACAAGGTGAAGTATTGGATCATCCGTTTGATATTATTTCTTATTTCGTTGATGAGTTTGTTATTTCAAAGAGGAATCTCGTTAGTCAGGTCTCTGGATGGCTGCTAAGTGATTGGAGAGAAGACAAAGTAGATGATTTTATTCAGGAGATGGAAATGAATGGATTTTGGTCCTTTGATAGAAGAGAAACTATCGCCAAGTCTCTGCTTAAGAATGTTGATTTCAAGAATGCATATCACTGCAATGAAAGTTTTCATTCTCAAGAAGATCTTGACAATCATGTTGATGTTTGCAACTTTAGAACTGCATTCTGTCAAAATGAGGGATGTGATGCCATGTTTTGCTCAGCTCATTTTGAGCAGCATGACTTGACCTGTCCTTTCAAGATAATTCCGTGTGAACAGAAGTGCTCAGATAGCATTATGAGACGTGATATGGACCGGCACTGCATAACTGTTTGTCCGATGAAGATAGTGAACTGTCCATTTTATGGAGTAGGTTGTAGAGCTGCCGTTGCTCAATGTATGATTGAAAAGCATTGCTCAGACGACATTAAGACACACTTGATGCACGTGCTTAAAGGCATCCACAGGGAAGCAACTGCTGAAGATCTCAGCCGACGAGTGGAGAAAATTATGCAGGCATCATCAGGGACCAGGTTAGCAGAGGCTCGGGACATGAGAATGTTCAAATCTATTGTCAAGAATCTTGAAGCAAAGGTAGGGCCTATGGAAGTAACTCCCAAGAATGAAGATAGTCATGAAAGTAGCACAGAAACACAAGGGCACTGA 1107 0.4192 MSDSPSKNPPTTEVDLGFEKVPEKIEEDGKVAGPMLHCGNCDTEVVHKLAEMFLPGLACACVDNTTGYPFSTPGSVAGNFRKEMIDYLTQRSESFVAESVILEGDPQGEVLDHPFDIISYFVDEFVISKRNLVSQVSGWLLSDWREDKVDDFIQEMEMNGFWSFDRRETIAKSLLKNVDFKNAYHCNESFHSQEDLDNHVDVCNFRTAFCQNEGCDAMFCSAHFEQHDLTCPFKIIPCEQKCSDSIMRRDMDRHCITVCPMKIVNCPFYGVGCRAAVAQCMIEKHCSDDIKTHLMHVLKGIHREATAEDLSRRVEKIMQASSGTRLAEARDMRMFKSIVKNLEAKVGPMEVTPKNEDSHESSTETQGH 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02978 368 SUPERFAMILY TRAF domain-like 213 314 - -
Aip02g02978 368 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 7 359 - -
Aip02g02978 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 291 IPR013083 -
Aip02g02978 368 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 7 359 IPR043211 -
Aip02g02978 368 Pfam TRAF-type zinc finger 227 285 IPR001293 GO:0008270
Aip02g02978 368 MobiDBLite consensus disorder prediction 350 368 - -
Aip02g02978 368 MobiDBLite consensus disorder prediction 346 368 - -
Aip02g02978 368 ProSiteProfiles Zinc finger TRAF-type profile. 222 274 IPR001293 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02978 Aip-Chr2 106390245 106393193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02978 - - gmx:100802183 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02978 02 106390245 106393193 Aip02g02978 02 106390245 106393193 ECH
Aip06g03610 06 133489271 133490465 Aip02g02978 02 106390245 106393193 PCT