Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02869 ATGCAGTGTTCTTATGATTCCAAAGGAAACAGTGTCCCCACTATTCTATTGCTAATGCAGGACCGTTTATACTCACAAGGAGGCTTAAAGGCTGAAGGTATATTTCGGATAAATCCGGAAAATAGTCAAGAGGAGCATGTGAGGGATCAGTTAAACAGAGGCATTGTGCCGGACAACATCGATGTCCATTGCTTGGCCGGGCTAATTAAAGCCTGGTTCCGGGAGCTTCCTTCGGGGATACTAGATGGACTCTCACCAGAGCAAGTTCTTCAGTGCAACACGGAAGAAGAGTCCGTTGAGCTCGTGAAGCAGCTAAAGCCAACGGAGTCTGCATTGCTCAGCTGGGCTATTGATCTCATGGCTGATGTTGTGGAAGAGGAGGAGTGTAACAAAATGAATGCTAGAAATATTGCAATGGTTTTTGCCCCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTGATGAACTTGCTCAAGACACTGATAATGAAGAATCTAAGAGAACGTGAAGAAACCACAACCGGATATTCTCCCATGTCATTTCGCTCATCGAATCACCAGTCCGAGGAAGAATATGACAGTCAGCGAGAAACAGACACCAGTGGTGAATTGAGAGGGACTAAGTCGGATTATAACGATCATCACCCTCACTATAGCCATAGCAGTGAAGGGGAGGAAGAAAGGGAGGCTGAATCTTTAAGCGAGATTGAAGAATGCTTCTTGAAGCAGTTGGATGATGATAACACAAAAGGGTTCTCACAACAAGAACCTTCAGGCTATTTGCAAGAGTACATTAACCCTATAAGTTGTTGCTCAGGTTTTAGCATCAAATCCATTGCATCAATTGCCGACGGAACCATAAATTCCAGCTTGAGTTCCATTGATGGAGAAAGGTTGAGGACAAGGGTGGCTGCCGTGAGCTCAAACATTGAAAAAAGCAGCCCGTCAATAGAATGTACAGGAACCAATGACGTGAAGATGATTGATAAGTTTTCCGATTCTGCTCCGCCGCTGCTTGCATCTAGTTGA 1050 0.4495 MQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDNIDVHCLAGLIKAWFRELPSGILDGLSPEQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEECNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKNLREREETTTGYSPMSFRSSNHQSEEEYDSQRETDTSGELRGTKSDYNDHHPHYSHSSEGEEEREAESLSEIEECFLKQLDDDNTKGFSQQEPSGYLQEYINPISCCSGFSIKSIASIADGTINSSLSSIDGERLRTRVAAVSSNIEKSSPSIECTGTNDVKMIDKFSDSAPPLLASS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02869 349 ProSiteProfiles Rho GTPase-activating proteins domain profile. 1 177 IPR000198 GO:0007165
Aip02g02869 349 SMART RhoGAP_3 10 173 IPR000198 GO:0007165
Aip02g02869 349 MobiDBLite consensus disorder prediction 178 241 - -
Aip02g02869 349 SUPERFAMILY GTPase activation domain, GAP 2 170 IPR008936 GO:0007165
Aip02g02869 349 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 318 - -
Aip02g02869 349 CDD RhoGAP 13 172 - -
Aip02g02869 349 PANTHER MKIAA1688 PROTEIN 1 318 IPR044785 GO:0005096
Aip02g02869 349 Pfam RhoGAP domain 13 147 IPR000198 GO:0007165
Aip02g02869 349 MobiDBLite consensus disorder prediction 193 234 - -
Aip02g02869 349 Gene3D Rho GTPase activation protein 2 180 IPR008936 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02869 Aip-Chr2 104946040 104947471 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02869 - - aip:107627925 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02869 02 104946040 104947471 Aip02g02869 02 104946040 104947471 ECH
Aip06g00536 06 6860125 6862308 Aip02g02869 02 104946040 104947471 PCT