Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02855 ATGCTCAAGCTCCTCAACACCAAGCTCCGCCGCTTCTTCCTCCTCCGGTGGTGGCCACTACGCCGCCGTAGTTCAAGGTGCAAAGTAGTTATCACAAAGAAGCCCAAAAACGACAACCCAAAACCCCAAACCGACCCAAGCTCGAATCTTTCCACCATTTCCGATCAAAACGCCCAAATGGGTACTCAAAAACACGAAAAACCAATTCGCATCGCAACCTTCAACGCCGCACTGTTTTCCATGGCGCCAGCGGTTCCACCTCAGAGAACAGAGAAAGCTCAGAACTTTGACGACCAAAACGGCGTCGCTTCGAAACAACGAAGACCCTTTGACCAAAATTCGAGGCCAAAGTCAACGAACGAGAAACCGAGGAGCATTCTGAAGCGTTCTCATTCTCACTCTCCCCTTCATCATCACATACCCTGTTCTGAAAACAGAGCACTCTGCATCAGCAACAAGCATCAACAACAACCACAACACCACTTTTCGAAATCGAAGCTAAGAGTTTCCATTAATTTACCGGATAACGAGATCTCCATGCTGAGAAATCGCCAACCGAGCTTCTCGGAGCACGAGAAGGTGGTGATTGCGGCGCGAAACGGGTGGCAGAGGAAGACGGTGGTGGAGGTGCTGAAAGAGGTAGGTGCAGATATATTGGGTTTGCAAGAAGTGAAGGCAGAAGAAGAGAATGGGATGAAGCCACTTTCAGATTTGGCGAAGGCATTGGGAATGGATCACTTTGTGTTTGCAGAGAGTTGGGCACCTCAGTTTGGAAATGCTGTCTTATCCAAATGGCCCATTAAACGTTGGACTTCCATCAACCTCTTTGATCACTCTGATTTTAGGAATGTTTTGAAGGCTACTATTGATGTACCTCAAGTAGGTGAACTCAATTTTTATTGTACTCACCTTGATCATCTTGATGAGAATTGGAGGATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAGCCTCACATCTTAGCAGGAGGCCTTAATTCATTGGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTTAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAAGTTGAAGTGATGAAATATCTCAAAAGTAAACAATACACAGATGCTAAGGACTTCGCCGGAGAATGCGAATCTGTCGTCGTGATTGCCAAAGGCCAAAGTGTTCAAGGGACATGCAAGTATGGAACTCGAGTCGATTACATATTATCGTCGTCGAATTGTTCGTATAAGTTCGTCCCCGGGTCCTATTTAGTCCTCTCCTCAAAAGGGACTTCAGATCATCACATAGTGAGAGCTGATGTGATGAAGGTAAATAGCAATAATGAAGGAAATAATGTGACAAGAAAAACTAAACAAGAAAGAAAACAGAAAGTTATAAGAATAACACATGAGACTCCCTCTAAAGGTATATGGAAAACACACCATGGAGAGATATATTAA 1464 0.4406 MLKLLNTKLRRFFLLRWWPLRRRSSRCKVVITKKPKNDNPKPQTDPSSNLSTISDQNAQMGTQKHEKPIRIATFNAALFSMAPAVPPQRTEKAQNFDDQNGVASKQRRPFDQNSRPKSTNEKPRSILKRSHSHSPLHHHIPCSENRALCISNKHQQQPQHHFSKSKLRVSINLPDNEISMLRNRQPSFSEHEKVVIAARNGWQRKTVVEVLKEVGADILGLQEVKAEEENGMKPLSDLAKALGMDHFVFAESWAPQFGNAVLSKWPIKRWTSINLFDHSDFRNVLKATIDVPQVGELNFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKQYTDAKDFAGECESVVVIAKGQSVQGTCKYGTRVDYILSSSNCSYKFVPGSYLVLSSKGTSDHHIVRADVMKVNSNNEGNNVTRKTKQERKQKVIRITHETPSKGIWKTHHGEIY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02855 487 ProSitePatterns AP endonucleases family 1 signature 1. 216 225 IPR020847 GO:0003677|GO:0004519|GO:0006281
Aip02g02855 487 Gene3D Endonuclease/exonuclease/phosphatase 181 444 IPR036691 -
Aip02g02855 487 MobiDBLite consensus disorder prediction 86 139 - -
Aip02g02855 487 MobiDBLite consensus disorder prediction 92 109 - -
Aip02g02855 487 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 194 - -
Aip02g02855 487 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 204 481 - -
Aip02g02855 487 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 204 481 - -
Aip02g02855 487 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 1 194 - -
Aip02g02855 487 MobiDBLite consensus disorder prediction 41 63 - -
Aip02g02855 487 MobiDBLite consensus disorder prediction 110 128 - -
Aip02g02855 487 SUPERFAMILY DNase I-like 200 442 IPR036691 -
Aip02g02855 487 MobiDBLite consensus disorder prediction 30 66 - -
Aip02g02855 487 Pfam Endonuclease/Exonuclease/phosphatase family 204 435 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02855 Aip-Chr2 104653245 104657672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02855 - - gsj:114390420 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02855 02 104653245 104657672 Aip02g02855 02 104653245 104657672 ECH
Aip06g00253 06 2972903 2979318 Aip02g02855 02 104653245 104657672 PCT