Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02814 ATGGTTTTGCTGTTAGGTCCCTCCACCTTCTTCTCCGGCGGACGTCGCCGGAGCAGGGAGCTCAGAATCGCCGTAGCTGGCGACGCATCCACCGGAAAATCCACCCTCATTGCTGCCATGGCTTCCGGCTCTTACTCCGAATCGGTTCCACCGCTGCTCCCTCCCACGCGGTTGCCTCATAATTTGTTCAATGATTCCGTTCCTCTCATCCTTATTGACACTCCTTCAAGTTTGGACAAACAAGGCACGCGCAATGAGGAATTGAAGCAAGCTGATGCAGTGGTTTTAACGTATGATTGTGAGGAACGTGCAACATTTGAGCGTTTGAGTAGTTACTGGCTTCCCGAGCTACGCCGGTTAGAGGTGAAGGCACCGGTGGTTGTGGTTGGTTGTAAGCTAGATCTGCGGGATGATAGTCGGCTAGTGAGCTTAGAGAGTTTCACTGCACAGATCATGCAACAATTCAAGGAAGTTGTTACCTGTATTGAATGTTCTGCAGCTACGATGTATCAGGTCCCTGAAGTTTTCTATTTTGCACAAAAATCAGTACTGCATCCAGTCGATCCATTGTTTGATTATGAAAGAAATGCTTTAACAGATAGATGTGTAAGGGCATTAAGAAGAATATTTGTAATCTGTGATCAAGACATGGATGGTGCCCTAAATGATGAAGAACTAAATGAATATCAGGTTAGATGCTTCAATGCACCATTGCAGCCATCTGAAATCACAAGAGTCAAAAGACTTATAGAGCAGAAAGTACCTGAAGGAGTAAACTATACTGGTCTTACTTTTCCAGGCTTTATTTATATCCATAATATGTATCTAAAGAAAGGAAGCACAGAGACATTTTGGACAGTTCTAAGAAAGTTTGGGTATGATAATAATTTAAAACTCCGGGATGATTGCCTTCCAGTTCCATCTAAGAAGGCTCCTGATCAGAGTGTGGAGCTAACAAGTGAAGCTATAGAGTTTTTGAATGGTACCTTTCGATTGTTGGATACAGATAAAGATCGATCCCTATGCCCTGCAGAAGTTGATAAGCTTTTTAATACTGCTCCAGAGAGTCCATGGAATGATGCTCCATACAAGGATGCAACCGAGAAAACTAGCATGGGTTATGCATCTCTGAAGGGATTTCTGTCTCAGTGGGCCCTCATGACATTACTTGATCCAACACTTAGCTTGGCTAATTTGATTTACATTGGATATAGTGGTAATCCTGCTACAGCTTTGCAAGTTACTCGTAGAAGATCAACAGACCGCAAGAAGCAAACAACAGAAAGAAATGTGTTCCAATGCTATGTTCTTGGTTCTAAAAATGCAGGGAAATCTGCTTTGCTGAATTCATTCTTGGAAAGGCCTTTCTCAGATAGTTATACTCCTACAACAGTTGAACAGTATGCAGCAAATGTAGTTGAACTAATTGGGGGAACTAGGAAAACTCTCATATTGTGCGAGATACCAGAGGATGGCGTATCAAAGTTTTTGTCAAATCAGAATTGTTTGGCTGCATGTGATGTAGCTCTTTTTGTGTATGACAGCTCAGATGAACATTCATGGAGGAAATCCAGAGATTTACTTGAGAGGGTTGTTAGAAAAGGAGAACTAACTGGCTATAGAGTTCCTTGCCTCCTCATTGCCGCTAAGGATGATTTAACTCCCCATCCGAGGGCGTTACTGGATTCAGTAAAGGTTGCTCAACAATTGGGAATAGAGGTACCTATTCATGTAAGTATGAAATTGGATGACTCAAGTTATCTGTACCAGAAGATTGTCAAGGCTGCAGAACACCCTCATTTGAACATTCCAGAGAGTGAGACTGCAAAGAAAAGAAAACAACAACAGCAATTTTTCTATCAATCTCTTATGTTTGCCTTAGTTGGAGCAGCTGTTGCAGCATTTGGTTTGTCAGTGAGCCGAGCACGTGCCATAAAGAAAAGTTCTGTTACTTAG 1956 0.4238 MVLLLGPSTFFSGGRRRSRELRIAVAGDASTGKSTLIAAMASGSYSESVPPLLPPTRLPHNLFNDSVPLILIDTPSSLDKQGTRNEELKQADAVVLTYDCEERATFERLSSYWLPELRRLEVKAPVVVVGCKLDLRDDSRLVSLESFTAQIMQQFKEVVTCIECSAATMYQVPEVFYFAQKSVLHPVDPLFDYERNALTDRCVRALRRIFVICDQDMDGALNDEELNEYQVRCFNAPLQPSEITRVKRLIEQKVPEGVNYTGLTFPGFIYIHNMYLKKGSTETFWTVLRKFGYDNNLKLRDDCLPVPSKKAPDQSVELTSEAIEFLNGTFRLLDTDKDRSLCPAEVDKLFNTAPESPWNDAPYKDATEKTSMGYASLKGFLSQWALMTLLDPTLSLANLIYIGYSGNPATALQVTRRRSTDRKKQTTERNVFQCYVLGSKNAGKSALLNSFLERPFSDSYTPTTVEQYAANVVELIGGTRKTLILCEIPEDGVSKFLSNQNCLAACDVALFVYDSSDEHSWRKSRDLLERVVRKGELTGYRVPCLLIAAKDDLTPHPRALLDSVKVAQQLGIEVPIHVSMKLDDSSYLYQKIVKAAEHPHLNIPESETAKKRKQQQQFFYQSLMFALVGAAVAAFGLSVSRARAIKKSSVT 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02814 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 218 IPR027417 -
Aip02g02814 651 Pfam EF hand associated 358 425 IPR013566 -
Aip02g02814 651 SMART ras_sub_4 18 186 - -
Aip02g02814 651 Gene3D - 299 489 - -
Aip02g02814 651 ProSiteProfiles EF-hand calcium-binding domain profile. 321 356 IPR002048 GO:0005509
Aip02g02814 651 ProSiteProfiles Miro domain profile. 429 598 IPR020860 GO:0003924|GO:0005525
Aip02g02814 651 Gene3D - 193 297 - -
Aip02g02814 651 CDD Miro2 428 610 - -
Aip02g02814 651 SMART rho_sub_3 23 186 IPR001806 GO:0003924|GO:0005525
Aip02g02814 651 ProSitePatterns EF-hand calcium-binding domain. 214 226 IPR018247 -
Aip02g02814 651 PRINTS Transforming protein P21 ras signature 21 42 - -
Aip02g02814 651 PRINTS Transforming protein P21 ras signature 122 135 - -
Aip02g02814 651 PRINTS Transforming protein P21 ras signature 161 183 - -
Aip02g02814 651 PANTHER MITOCHONDRIAL RHO GTPASE 18 499 - -
Aip02g02814 651 Gene3D - 497 597 IPR027417 -
Aip02g02814 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 428 600 IPR027417 -
Aip02g02814 651 SUPERFAMILY EF-hand 189 385 IPR011992 -
Aip02g02814 651 Gene3D - 12 186 IPR027417 -
Aip02g02814 651 ProSiteProfiles Miro domain profile. 18 185 IPR020860 GO:0003924|GO:0005525
Aip02g02814 651 SMART rab_sub_5 21 186 - -
Aip02g02814 651 Pfam Ras family 435 555 IPR001806 GO:0003924|GO:0005525
Aip02g02814 651 Pfam Ras family 23 183 IPR001806 GO:0003924|GO:0005525
Aip02g02814 651 Pfam EF hand associated 237 321 IPR013567 -
Aip02g02814 651 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Aip02g02814 651 PANTHER RHO FAMILY GTPASE 18 499 IPR003578 GO:0005525|GO:0007264
Aip02g02814 651 PIRSF Miro 17 651 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02814 Aip-Chr2 104108522 104114720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g02814 2 649 EF-hand Containing Proteins AT3G63150 54.630 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02814 K07870 - gmx:100806983 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g02814 02 104108522 104114720 Aip02g02814 02 104108522 104114720 ECH
Aip06g00218 06 2310516 2316609 Aip02g02814 02 104108522 104114720 PCT