Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g02678 ATGGCGGCGATGCTGAAGAGCTATAGTAGCAATGCGTGCTTCCCTGCTTCTGGTTTCGCTGTTTTTCGCTCCAACAATGCCACCAACGCCAGTAACAAGAGTAAAATCAAGGTTGTTGGTAACACCGGAAGTAACTCCACGAGGGAAGCAATCCATGCCAGTGAGCAGGGTTTTGCAGTTGGAATGCATGCTGCCCTTCATATAAACCCTTACTACGGCAAAACCTCCCTGGACGGTATGATTTCTCACTTCGAAAGCGTGATTTCCATGGGCCCTACAATCATATATAATGTTCCTTCGAGGACTGGTCAAGATATTCCTCCTCACGTGATTCAAACCTTGGCTCAAAGTGCTACCTTGGCCGGTGTCAAGGAGTGTGTTGGAAACGATCGGATCAAACAGTACACGGATGATGGCATTGTTGTGTGGAGTGGCAACGATGATCAATGCCATGATGCTAGATGGGGCTATGGTGCCACCGGAGTGATATCTGTCACCAGCAACCTTGTTCCTGGTTTGATGCGAGACATCATGTTTGCAGGGAAGAATCCAACATTGAATTCAAAGCTCCTTCCTCTGATGGACTGGCTTTTCCAGGAGCCAAACCCGATTGGTTTAAACACAGCTCTTGCCCAACTTGGGGTTGTCAGACCGGTTTTCAGGCTGCCGTACGTGCCGCTCCCTGCGGAGAAAAGGATTGAGTTTGTGAACTTGGTGAAGCAAATTGGCCGAGAGCATTTTGTTGGAGACAAAGATGTTCAGGTTCTTGATGATGATGATTTTATCTTAGTTGGTCGATATTAG 804 0.4764 MAAMLKSYSSNACFPASGFAVFRSNNATNASNKSKIKVVGNTGSNSTREAIHASEQGFAVGMHAALHINPYYGKTSLDGMISHFESVISMGPTIIYNVPSRTGQDIPPHVIQTLAQSATLAGVKECVGNDRIKQYTDDGIVVWSGNDDQCHDARWGYGATGVISVTSNLVPGLMRDIMFAGKNPTLNSKLLPLMDWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLPAEKRIEFVNLVKQIGREHFVGDKDVQVLDDDDFILVGRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g02678 267 SUPERFAMILY Aldolase 32 242 - -
Aip02g02678 267 Gene3D Aldolase class I 23 267 IPR013785 -
Aip02g02678 267 PANTHER DIHYDRODIPICOLINATE SYNTHASE 34 267 IPR002220 GO:0016829
Aip02g02678 267 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE, CHLOROPLASTIC 34 267 - -
Aip02g02678 267 ProSitePatterns Dihydrodipicolinate synthase signature 2. 96 126 IPR020625 GO:0016829
Aip02g02678 267 PRINTS Dihydrodipicolinate synthase signature 91 108 IPR002220 GO:0016829
Aip02g02678 267 PRINTS Dihydrodipicolinate synthase signature 68 84 IPR002220 GO:0016829
Aip02g02678 267 PRINTS Dihydrodipicolinate synthase signature 36 54 IPR002220 GO:0016829
Aip02g02678 267 Pfam Dihydrodipicolinate synthetase family 31 241 IPR002220 GO:0016829
Aip02g02678 267 SMART DHDPS_2 4 243 IPR002220 GO:0016829
Aip02g02678 267 PIRSF DHDPS 26 254 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g02678 Aip-Chr2 102274197 102276364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g02678 K01714 - gmx:100788930 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g02583 04 113921766 113924721 Aip02g02678 02 102274197 102276364 PCT