Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00642 ATGGAAATAGTGCTCATCATATCTTCTTCTCTGATTTCTCCGTTAGAAACGAACAGTCGACAAAGCCTCAAATTAAAGATGGAACAAGCACAACAAAAATATGCAGTTGTGAGTGGAGCAAACAAAGGAATTGGAATAGAAATAGTAAGGCAATTAGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAGAAGAGAGGCCTTCATGCTTTGGAAACTCTCAAAGATCTCTCTCATCTTATCCTCTTTCACCAGCTTGATGTTGCTGATCCTGCTAGTGTGGATTCTCTTGCAAATTTCATCAAATCCGAATTTGGAAAACTCCACATTTTGATCAACAATGCAGGGATTGGTGGACTTGTGATTAAGGACAATGATTGGGTCCCTCAAGTGTTATTGAAAAGCAGGGAATTATCCAATGATGTAATAGAGAAAGCCGGAATCATTCAAACATTCGAGCTAGCTGAAGAATGCTTGCAAATAAATTATTATGGTGCTAAAAGAACATCTGAAGCCCTTCTCCCTCTTCTCCAATTATCTGAATCACCAAGAATTGTGAATGTATCATCCTCCCTAGGAAAGTTAAAGCGTGTGTCAAATGAATGGGCTAAAGGAATCTTGGGTGATGCTGAAAACCTTACAGAAGAGAGAGTTGATGAAGTGTTGAATGAATTTCTGAAAGATTTCAAAGAAGGGTGTTTAGAAAGAAAAGGATGGCCTAAGGTTCTTGGTGCCTATATTATCTCAAAAGCTGCAATGAATGCATATACAAGAATTGTTGCTAAAAAGTACCCTACTATATGCATCAATAGTGTGTGTCCAGGTTATGTTAAAACTGATATAACTGCCAATACTGGATTTTTAACGGCAGAAGAAGGTGCTGCTAGTCCTGTCAAATTAGCATTGCTTTCAAATGCCTCTTCTGGCCTTTTCTATTCTCAGAATGAAGTTTCTTCATTCTAA 969 0.3798 MEIVLIISSSLISPLETNSRQSLKLKMEQAQQKYAVVSGANKGIGIEIVRQLASNGVKVVLTSRDEKRGLHALETLKDLSHLILFHQLDVADPASVDSLANFIKSEFGKLHILINNAGIGGLVIKDNDWVPQVLLKSRELSNDVIEKAGIIQTFELAEECLQINYYGAKRTSEALLPLLQLSESPRIVNVSSSLGKLKRVSNEWAKGILGDAENLTEERVDEVLNEFLKDFKEGCLERKGWPKVLGAYIISKAAMNAYTRIVAKKYPTICINSVCPGYVKTDITANTGFLTAEEGAASPVKLALLSNASSGLFYSQNEVSSF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00642 322 Pfam short chain dehydrogenase 33 198 IPR002347 -
Aip02g00642 322 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 108 119 IPR002347 -
Aip02g00642 322 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 185 193 IPR002347 -
Aip02g00642 322 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 248 267 IPR002347 -
Aip02g00642 322 PANTHER SALUTARIDINE REDUCTASE-LIKE 27 322 - -
Aip02g00642 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 311 IPR036291 -
Aip02g00642 322 PRINTS Glucose/ribitol dehydrogenase family signature 34 51 IPR002347 -
Aip02g00642 322 PRINTS Glucose/ribitol dehydrogenase family signature 108 119 IPR002347 -
Aip02g00642 322 PRINTS Glucose/ribitol dehydrogenase family signature 179 195 IPR002347 -
Aip02g00642 322 PRINTS Glucose/ribitol dehydrogenase family signature 248 267 IPR002347 -
Aip02g00642 322 PRINTS Glucose/ribitol dehydrogenase family signature 267 284 IPR002347 -
Aip02g00642 322 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 27 322 - -
Aip02g00642 322 Gene3D - 23 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00642 Aip-Chr2 9606810 9609183 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00642 8 288 Acyl Lipid Metabolism Gene Families AT1G24360 20.070 1.95e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00642 K15095 - gmx:100801677 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00642 02 9606810 9609183 Aip02g00642 02 9606810 9609183 ECH
Aip02g00642 02 9606810 9609183 Aip04g02726 04 116920778 116922995 PCT