Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00638 ATGGAAGAAGCTCCACAAAGGTATGCAGTTGTGAGTGGAGCAAACAAAGGAATTGGATTGGAGGTAGTAAGGCAATTGGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAGAAGAGAGGCCTTCATGCTTTGGAAACCCTCAAAGATCTCTCTGATTTTGTGTTCTTTCACCAGCTTGATATTGCTGATCCTGCAAGTATTGCTTCTCTTGCAGATTTCATCAAATCCAAATTTGGCAAACTTGATATTCTGGTTAACAATGCAGGGGTTAATGGACTTGTAATTACAGACAACGATTTAATCCCTTCAGTAATATTGACACCCCAGGATTTATCTGAAGAAGAACTAGAAAAAGCAAGAAATATTGATGCCGAAAACCTTACTGAAGAGAGAGTGGATGTGGTGTTAAATGAGTTTATGAAAGATTTCAAAGAAGGGTCATTAAAAGACAAAGGCTGGCCTACGACTTTTGGTGCCTACACTCTCTCCAAAGCTGCTATGAATGCCTATACAAGAATTCTTGCCAAAATGTTCCCTACTTTTTGCATCAATTGTCTTTGTCCTGGTTATATTAAGACTGATATCACTGCAAATACTGGCTTTTATACGGTGGAAGAAGGTGCTGCTAATGTTGTGAGATTAGCATTACTTCCAAATGGTAGTCCTTCTGGTCTTTTTTATAACAGGAGTGAAGTGCATTCCTATTAA 717 0.3877 MEEAPQRYAVVSGANKGIGLEVVRQLASNGVKVVLTSRDEKRGLHALETLKDLSDFVFFHQLDIADPASIASLADFIKSKFGKLDILVNNAGVNGLVITDNDLIPSVILTPQDLSEEELEKARNIDAENLTEERVDVVLNEFMKDFKEGSLKDKGWPTTFGAYTLSKAAMNAYTRILAKMFPTFCINCLCPGYIKTDITANTGFYTVEEGAANVVRLALLPNGSPSGLFYNRSEVHSY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00638 238 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Aip02g00638 238 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 IPR002347 -
Aip02g00638 238 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 221 IPR036291 -
Aip02g00638 238 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 104 - -
Aip02g00638 238 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 120 237 - -
Aip02g00638 238 PANTHER SALUTARIDINE REDUCTASE-LIKE 1 104 - -
Aip02g00638 238 PANTHER SALUTARIDINE REDUCTASE-LIKE 120 237 - -
Aip02g00638 238 Pfam short chain dehydrogenase 8 95 IPR002347 -
Aip02g00638 238 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Aip02g00638 238 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Aip02g00638 238 PRINTS Glucose/ribitol dehydrogenase family signature 182 199 IPR002347 -
Aip02g00638 238 PRINTS Glucose/ribitol dehydrogenase family signature 163 182 IPR002347 -
Aip02g00638 238 Gene3D - 2 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00638 Aip-Chr2 9540571 9543698 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00638 3 199 Acyl Lipid Metabolism Gene Families AT1G63380 28.111 1.03e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00638 K15095 - gmx:100801677 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00638 02 9540571 9543698 Aip04g02728 04 116951225 116989803 PCT