Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00346 ATGGAAGAGAAGAAAGCAAAGGCCAAAGCTTTTCTTCTCTTCTTCTTCTTCTTCTCAGTGTTCATCACACTCTCCACCGCCACCAAAGAAACCCAAACCCTTATCCTCCACCCACTCCCATCTCAACCCACCCTCTATTGGCCCGAACTCGAAACCGAGCAACCCGACCCGGAACCCGAATCAGCTTCGCTCTCTGTCTCTCTTCACCACATCGATGCACTCTCTTCCAACAAAACACCGCACGAATTGTTTACCCAAAGGCTCCAAAGGGACGCTGCTAGGGTCAAAATCGTAACTTCCTTCGTCTCCAAAGCTCCATTTTCTTCTTCACCCAAGAACCAAACCGGGTTCGGATCACAACCCGGTTTCAGCTTCAGCAGCTCAGTCATTTCGGGTTTGGCTCAGGGCAGCGGCGAGTACTTCACGCGCCTCGGCGTCGGAACGCCGCCACGCTACCTCTACATGGTGCTCGACACCGGAAGCGACGTCGTTTGGCTCCAATGTGCGCCGTGCAAGAAGTGCTACTCAGAGTCCGACCCAGTTTTCGACCCGAAAGGGTCCCGGACCTTTGCCCCAGTACCCTGCGGTTCTCCGCTCTGCCGGCAGCTGGACTCGCCGGGATGCGACGCCCGGAAAAAGGTGTGCGAGTATCAGGTCTCATATGGAGACGGGTCCTTCACCGTCGGCGATTTTGCCACTGAGACATTGACTTTCCGGCGACGCGCCAGCGTCCCGCGCGTGGCCTTAGGCTGTGGACATGACAACGAGGGGCTCTTTGTTGGGGCTGCGGGCCTTTTGGGCCTGGGCCGGGGCATGCTTTCCTTTCCGACCCAAGCCGGTGCCCGGTTCAATAACAAATTCAGTTATTGTTTAGTGGACCGAGCTGCTTCATCAAAACCGTCTTCAATGGTTTTTGGTGATTTGGCAGTTTCGAGAGCGGCACGGTTCACTCCGTTGTTAAAGAACCCAAAGCTCGACACATTTTACTATGTCGAACTGTTGGGAATTAGTGTTGGCGGGGTGCTGGTTCGTGGAATTTCGGCTTCTTTGTTTCGGCTTGACCGGACCGGAAATGGTGGGGTAATTATTGACTCGGGCACCTCAGTGACTCGATTGACCCGACCCGCTTATGAGGCTTTGAGAGACGCTTTTCGGGTTGGGGCAGCCCGATTGAAACGGGCACCCGAATACTCGTTATTTGATACTTGCTTTGATCTTTCGGGGATGACGCAAGTGAAAGTTCCGACCGTAGTGCTACATTTTCGAGGTGCCGATGTGTCACTTCCAGCCGGGAATTACCTAATTCCGGTGGATGATAAGGGAACTTACTGTTTCGCGTTCGCTGGGACGATGAGCGGGTTATCCATAATTGGGAATATCCAGCAACAAGGGTTTCGGGTCGTGTTTGATTTGGCGGGTTCTCGGATCGGGTTTGCACCAAGAGGAGCAAGGGATGTTCTGTGCGGTGACGAATCGGATGCGATGGATGAGGTGGAAGCGGATGCAGTTATGGCAGTAATAAGGAGGGTGCATGCAACGATTGTTGTTGTTGAAGACGTTGTCGGCGGACATAGGGATGGTGCATATACCACATGTTGGTGGCGGTGGCTGTATCTCTTCTTCGTCGTTAACTTGGTTTTCATCAATGTCAATATCAATAACATTCACATTATTGTTCTTTCTTTAAGGCAGAAACCCTAA 1701 0.5262 MEEKKAKAKAFLLFFFFFSVFITLSTATKETQTLILHPLPSQPTLYWPELETEQPDPEPESASLSVSLHHIDALSSNKTPHELFTQRLQRDAARVKIVTSFVSKAPFSSSPKNQTGFGSQPGFSFSSSVISGLAQGSGEYFTRLGVGTPPRYLYMVLDTGSDVVWLQCAPCKKCYSESDPVFDPKGSRTFAPVPCGSPLCRQLDSPGCDARKKVCEYQVSYGDGSFTVGDFATETLTFRRRASVPRVALGCGHDNEGLFVGAAGLLGLGRGMLSFPTQAGARFNNKFSYCLVDRAASSKPSSMVFGDLAVSRAARFTPLLKNPKLDTFYYVELLGISVGGVLVRGISASLFRLDRTGNGGVIIDSGTSVTRLTRPAYEALRDAFRVGAARLKRAPEYSLFDTCFDLSGMTQVKVPTVVLHFRGADVSLPAGNYLIPVDDKGTYCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRIGFAPRGARDVLCGDESDAMDEVEADAVMAVIRRVHATIVVVEDVVGGHRDGAYTTCWWRWLYLFFVVNLVFINVNINNIHIIVLSLRQKP 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00346 566 PANTHER ASPARTYL PROTEASES 34 483 IPR001461 GO:0004190|GO:0006508
Aip02g00346 566 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 34 483 - -
Aip02g00346 566 Pfam Xylanase inhibitor N-terminal 140 307 IPR032861 -
Aip02g00346 566 Gene3D Acid Proteases 124 304 IPR021109 -
Aip02g00346 566 CDD cnd41_like 139 482 IPR033873 -
Aip02g00346 566 PRINTS Pepsin (A1) aspartic protease family signature 146 166 IPR001461 GO:0004190|GO:0006508
Aip02g00346 566 PRINTS Pepsin (A1) aspartic protease family signature 455 470 IPR001461 GO:0004190|GO:0006508
Aip02g00346 566 PRINTS Pepsin (A1) aspartic protease family signature 361 372 IPR001461 GO:0004190|GO:0006508
Aip02g00346 566 Gene3D Acid Proteases 305 490 IPR021109 -
Aip02g00346 566 Pfam Xylanase inhibitor C-terminal 329 479 IPR032799 -
Aip02g00346 566 SUPERFAMILY Acid proteases 133 481 IPR021109 -
Aip02g00346 566 ProSiteProfiles Peptidase family A1 domain profile. 140 479 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00346 Aip-Chr2 4601436 4606958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00346 130 478 Miscellaneous Gene Families AT1G77480 28.158 8.60e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00346 K22683 - gmx:100791511 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00346 02 4601436 4606958 Aip02g00346 02 4601436 4606958 ECH
Aip06g01239 06 18381957 18384108 Aip02g00346 02 4601436 4606958 PCT