Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00078 ATGTCAGAAATTGACATGGCCGTTATTAAACCTGAGATGATGAAGTCATATATTTGGCTTCAGACTTCTGATGGTTCAATCCAACAAGTCGAACAAGAAATCGCAATGTTTTGCCCACTGATATGTCAAGAAATAATAACAAAAGGCATGGGTTCGTCAAAGAATTCTGCAATATCTCTTCCTCAACAAGTCACCCCTTCTACGTTGAGCTTAATTCTTGATTATTGTCGCTTTCATCAAGTACCTGGCCGCTCAAACAAGGAACGGAAATCTCATGACGAGAAGTTCGTTAGGATGGGCACAAATAGGCTTTGTGAGTTGGTATCTGCTGCAGACAGCCTTCAGTTAAGGCCATTGGTTGATCTCATCAGTCGTGCACTTGCTCGAAAAATTGAAGGAAGAACACCGGAGGAGATACGTGAAATATTTCATCTGCCTGATGATCTTACAGAGGAAGAGAAGTTGGAGCCCTTGAAAAACATAACTGATGACCCAAGGATCAGACTTTTGAATCGTTTATATGCAAAAAAGAGGAAAGAACTAAAAGAGCGTGAAAGGTTAAAGAATGTCGAAATTGAAGAAGAGCGTGTAGATGAACGTTCAGTTGATGACCTTTTAACTTTCATTAATGGAAATGATAGAGATGCAAAGGCGGTTAAAACTTCAAAGAGTAAAAAGAAGAACCGGAAGAAAAAAGACCAACAGAAGAACTCTTCTTTGAAGGAAGATACTGCACTGGATAAGAAGGAGTTAAATGGGCATGATACCGGTGACCAAAGTTCTGATGGAAATATAATTGGCGAGACATCAAATTTACTGTACGAAGAGGATGGCTCCTTTTCTCCTAAGATTGACTTTGATGATGGAGATTTGGATGATGATGGGATTGAGCCTGCAATTAGGGAAAAAATTGACAGGGAGGTGGCAGATTTTGCTCGCAGAATAAATTCTGACTGGACAGAGAGGATGCAAGATTTTTTAACATCTGGGAGAGAGAGGACATCAACGTTTTCTGCTACCAATGGGAATGGTTATCTAAGGCGACATGCGTGA 1053 0.4027 MSEIDMAVIKPEMMKSYIWLQTSDGSIQQVEQEIAMFCPLICQEIITKGMGSSKNSAISLPQQVTPSTLSLILDYCRFHQVPGRSNKERKSHDEKFVRMGTNRLCELVSAADSLQLRPLVDLISRALARKIEGRTPEEIREIFHLPDDLTEEEKLEPLKNITDDPRIRLLNRLYAKKRKELKERERLKNVEIEEERVDERSVDDLLTFINGNDRDAKAVKTSKSKKKNRKKKDQQKNSSLKEDTALDKKELNGHDTGDQSSDGNIIGETSNLLYEEDGSFSPKIDFDDGDLDDDGIEPAIREKIDREVADFARRINSDWTERMQDFLTSGRERTSTFSATNGNGYLRRHA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00078 350 MobiDBLite consensus disorder prediction 216 266 - -
Aip02g00078 350 MobiDBLite consensus disorder prediction 235 256 - -
Aip02g00078 350 Coils Coil 170 190 - -
Aip02g00078 350 Pfam Skp1 family, tetramerisation domain 18 80 IPR016073 GO:0006511
Aip02g00078 350 PANTHER SKP1 1 279 IPR016897 GO:0006511
Aip02g00078 350 Pfam Skp1 family, dimerisation domain 118 154 IPR016072 GO:0006511
Aip02g00078 350 SMART skp1_3 15 116 IPR001232 GO:0006511
Aip02g00078 350 PANTHER SKP1-LIKE PROTEIN 20 1 279 - -
Aip02g00078 350 SUPERFAMILY Skp1 dimerisation domain-like 91 160 IPR036296 GO:0006511
Aip02g00078 350 SUPERFAMILY POZ domain 16 80 IPR011333 -
Aip02g00078 350 Gene3D Potassium Channel Kv1.1; Chain A 12 162 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00078 Aip-Chr2 1452087 1457453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00078 - - gmx:100794666 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00078 02 1452087 1457453 Aip02g00078 02 1452087 1457453 ECH
Aip02g00078 02 1452087 1457453 Aip04g02838 04 119533547 119535544 ECH
Aip04g02838 04 119533547 119535544 Aip02g00078 02 1452087 1457453 PCT