Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g00028 ATGGTTTCAGCGGCAGATTCCATACAAAGGTATGCAGTAGTTACAGGTTCAAACAAAGGGATAGGGTTGGAAACTGTTAAAGGGTTGGCATCGAATGGTGTGAAGGTTGTTCTGACAGCAAGAGATGAGAAAAGGGGATATGAAGCTGTTGAGAAATTGAGGAGAGAGTGTGGTTTCTCTAACGAACTTGTGATCTTTCACCAGCTTGATGTAACTGATTCTTCTAGCATTGCATCATTGGTGAAATTTGTGAAATTCCAATTTGGAAGACTTGATATCTTGTGGAAAGAGCTTAATCAAACTTATGATATGGCTGAAAAATGCTTAACAACAAACTACTATGGTGCTAAAGAAACAACTGAGGCATTTCTTCCTTTGCTTCAGTTATCCACTTCACCTATGATTGTCAATGTTTCTTCCACAGCAGGGTTGTTACAGCACATATCAAATGAATGGGCTAAAGGGGTGCTAGATGACACCGAAAACCTCACAGAAGATCTAATAGACAAGGTACTAAGGGAGTTCATGAAAGATTTCAAAGAAGGTTCATTGAAAACCAAAGGCTGGCCAACCTATCTGTCTGCATATATGCTCTCAAAAGCAGCCATGAATTCTTACACAAGGCTTCTGGCACGGAAGCATCCGAAATTCTGTGTTAATTGTGTCTGTCCAGGTTTTGTAAAAACGGACATTAACCGAAATACCGGAATCTTATCGGTTGAAAATGGTGCTGCTAGTGTTGTTAGATTAGCATTGTTGCCTAGTGGTTCACCTTCTGGCTACTTCTTTGCTATGCAAGAATTGTCAAGCTTTTGA 816 0.4007 MVSAADSIQRYAVVTGSNKGIGLETVKGLASNGVKVVLTARDEKRGYEAVEKLRRECGFSNELVIFHQLDVTDSSSIASLVKFVKFQFGRLDILWKELNQTYDMAEKCLTTNYYGAKETTEAFLPLLQLSTSPMIVNVSSTAGLLQHISNEWAKGVLDDTENLTEDLIDKVLREFMKDFKEGSLKTKGWPTYLSAYMLSKAAMNSYTRLLARKHPKFCVNCVCPGFVKTDINRNTGILSVENGAASVVRLALLPSGSPSGYFFAMQELSSF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g00028 271 Gene3D - 96 271 - -
Aip02g00028 271 Gene3D - 5 95 - -
Aip02g00028 271 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 6 94 - -
Aip02g00028 271 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 93 271 - -
Aip02g00028 271 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 6 94 - -
Aip02g00028 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 257 IPR036291 -
Aip02g00028 271 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 93 271 - -
Aip02g00028 271 Pfam Enoyl-(Acyl carrier protein) reductase 186 235 - -
Aip02g00028 271 PRINTS Glucose/ribitol dehydrogenase family signature 196 215 IPR002347 -
Aip02g00028 271 PRINTS Glucose/ribitol dehydrogenase family signature 89 100 IPR002347 -
Aip02g00028 271 PRINTS Glucose/ribitol dehydrogenase family signature 215 232 IPR002347 -
Aip02g00028 271 PRINTS Glucose/ribitol dehydrogenase family signature 127 143 IPR002347 -
Aip02g00028 271 PRINTS Glucose/ribitol dehydrogenase family signature 11 28 IPR002347 -
Aip02g00028 271 Pfam short chain dehydrogenase 11 146 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g00028 Aip-Chr2 859435 862066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip02g00028 13 236 Acyl Lipid Metabolism Gene Families AT1G24360 19.915 8.45e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g00028 K15095 - gmx:111064653 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g00028 02 859435 862066 Aip02g00028 02 859435 862066 ECH
Aip04g02728 04 116951225 116989803 Aip02g00028 02 859435 862066 PCT