Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03335 ATGTTGTACGTGCAACAGCAGCCGATGATTAAGAAGGCAGAGAGGAACGGCGGCGGCGGCAACAGCAGCAGCTGGAGCAGAGGCATAGAGGAAGAGAGACTTAAGATTGTGGACCTCAGTGGCATGTCTTTGGACTCTCTTCCCAACCCTTCTCTTAACTTGGCCACCATTTGCAAGTTGGACCTCTCTAACAACAATCTCGAGAATATTCCGGAGTCGTTGACAGCAAGACTGGTGAATTTGGTGGTGTTGGATGTGCACTCCAACCAGCTTAGAAGGCTACCGAACTCCATTGGCTGCCTGTGTAAACTAAAGGTCTTGAATGTAGCTGGAAACATGATCCAATACCTTCCAAAAACAATTGACAATTGCAAATCATTGGAGGAACTGAACGCCAACTTCAACAAACTAATACAGCTTCCAGAAAATATTGGTTTGGAACTCAAAAAGCTGAAAAAGTTATCAGTAAATTCCAATAAACTCCTCTTCCTTCCACACTCAACCTCAAACCTCACCTCTCTCAGGCTCCTCGACGCCCGCCTCAACTGCCTCCGCTCTCTCCCCGAAGACCTCGAAAAACTCGTCAGCCTTGAAACCCTCAACATCAGCCAGAACTTTCACTTCCTCCGTTCTCTCCCTTGCTCCGTCGGTCTTCTCTTCTCCCTCGTCGAACTCGACATCAGCTACAACAGAATCACCTCCTTGCCTCCTTCCATTGCCTGTCTCAACAAGCTCCAGAAGCTCTGTGTTGATGGAAATCCGCTCATGTCGCCGCCACTAGAAGTGGTGGAACAAGGCCTATATGCCGTGAAGGGGTACCTCTATCAGAAGATGAACTCTTCGTCGTCGTCGTCGTCGTCGGAGAGCCCGTCAACGAAGAAGAAGTCATGGGTTGGGAAGTTGGTGAAGTACAAAACGTTCAATGGAGGAGAAACAAAGAGGAGGAGCAGCCATGAAGAATGCGAAGGTTTCGTAATGCCGGATTATAAGCCCATTGATAGTCTTGCTTCACCGCGTTACATGGGAATCTTCTCGCCTCGCCGCCTCTTCTCGCCTCGTAATTACTTCACCAACTCATGA 1080 0.488 MLYVQQQPMIKKAERNGGGGNSSSWSRGIEEERLKIVDLSGMSLDSLPNPSLNLATICKLDLSNNNLENIPESLTARLVNLVVLDVHSNQLRRLPNSIGCLCKLKVLNVAGNMIQYLPKTIDNCKSLEELNANFNKLIQLPENIGLELKKLKKLSVNSNKLLFLPHSTSNLTSLRLLDARLNCLRSLPEDLEKLVSLETLNISQNFHFLRSLPCSVGLLFSLVELDISYNRITSLPPSIACLNKLQKLCVDGNPLMSPPLEVVEQGLYAVKGYLYQKMNSSSSSSSSESPSTKKKSWVGKLVKYKTFNGGETKRRSSHEECEGFVMPDYKPIDSLASPRYMGIFSPRRLFSPRNYFTNS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03335 359 Gene3D Ribonuclease Inhibitor 144 274 IPR032675 -
Aip01g03335 359 Gene3D Ribonuclease Inhibitor 3 143 IPR032675 -
Aip01g03335 359 PANTHER LEUCINE-RICH REPEAT-CONTAINING 26 351 - -
Aip01g03335 359 SUPERFAMILY L domain-like 31 260 - -
Aip01g03335 359 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Aip01g03335 359 ProSiteProfiles Leucine-rich repeat profile. 80 101 IPR001611 GO:0005515
Aip01g03335 359 Pfam Leucine rich repeat 59 114 IPR001611 GO:0005515
Aip01g03335 359 ProSiteProfiles Leucine-rich repeat profile. 56 77 IPR001611 GO:0005515
Aip01g03335 359 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 26 351 - -
Aip01g03335 359 SMART LRR_bac_2 124 143 - -
Aip01g03335 359 SMART LRR_bac_2 78 97 - -
Aip01g03335 359 SMART LRR_bac_2 148 167 - -
Aip01g03335 359 SMART LRR_bac_2 219 238 - -
Aip01g03335 359 SMART LRR_bac_2 54 73 - -
Aip01g03335 359 SMART LRR_bac_2 194 215 - -
Aip01g03335 359 SMART LRR_bac_2 171 190 - -
Aip01g03335 359 SMART LRR_bac_2 101 120 - -
Aip01g03335 359 SMART LRR_typ_2 219 242 IPR003591 -
Aip01g03335 359 SMART LRR_typ_2 148 170 IPR003591 -
Aip01g03335 359 SMART LRR_typ_2 78 100 IPR003591 -
Aip01g03335 359 SMART LRR_typ_2 54 77 IPR003591 -
Aip01g03335 359 SMART LRR_typ_2 101 124 IPR003591 -
Aip01g03335 359 SMART LRR_typ_2 125 147 IPR003591 -
Aip01g03335 359 SMART LRR_typ_2 171 194 IPR003591 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g03335 55 248 Receptor kinase-like Gene Family AT4G13920 33.990 2.48e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03335 - - gmx:100783239 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03335 01 136465627 136467572 Aip03g02407 03 38984479 38986774 PCT