Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g03316 ATGCCACCAGCTATGGTGCTTTCGCCATTGCCGGAATCCCCGTCGGTGCTTTCAGTTCCGGAATCTCCGCCGGAGACTCGTCGATTCGGAGATATCAGAGGTTTGCAGTGGCGTATCAGTCTCGGGGTTTTGCCTTCTTCGAATTCCATTGATGATCTTCGTCGTGCCACCGCTAATTCTAGAAGGAGATATGCCAATTTGAGAGGTCGCCTCCTGGTTGATCCCCATCTTCCAAAAGATGGAGGTAGTCCACCCAATCTTATCATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTCCGCAATGCTGAGTTGGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGGGGCTACTTCCAGACACCAGGATTCCAAGGCTTATTGAGACGGATTTTATTGCTGTGGTGTCTCAAACACCCAGAATGTGGTTATAGACAAGGAATGCATGAGTTACTTGCCCCGCTGCTATATGTTCTCCAAGTTGATGTGGAACATCTTTCCGCAATACGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGGCCTTTTCTGTCAGGAGAATGATCATCGTTACAGCTTTGATATGAGAAAATCTACAGACTCAGAGGATGATATTGGTTCCTGTGGAGATGCATTGAAAATCCAGAGTCTCGATGAGCTTGATCCTAGTATACGAGCGCTTGTATTGCTAGGTGATGCTTATGGGGCTGAAGGTGAACTTGGTGTTGTTTTGTCCGATAAATTCATGGAACATGATGCTTACTGCATGTTTGAGGCATTAATGAGTGGTGCTCATGGTTCAGTTGCAATGGCTGATTTCTTCTCTTATTCACCTGTGGCTGGGTCCAATACCGGCTTGCCTCCTGTAATTGAAGCTTCAAATGCATTGTATCATTTGTTGTATCACGTTGATTCATCTCTACACAGTCATCTTGTTGATCTTGGGGTTGAACCCCAGTACTTTGCTCTCCGCTGGTTCCGAGTTTTATTTGGACGGGAATTTTCACTCGACAACCTCTTGATCATCTGGGATGAGATATTTTTATCAGATAATGGTAAAAAGCAGAAGCTTGCGGAGGACAATACAGAATCTGGTTTTATGATATTACAATCACCTCGTGGAGCCTTTATCACGGCTATGGCTGTAGCAATGTTACTTCGATTAAGATCTTCACTACTGGCAACTGAAAATCCCACAATCTGTCTCCAGAGGTTATTAAACTTCCCCGAGGACACAGATATCGATAAACTACTAGCAAAGGCTAAATCCTTGCAGGCTATTGCATTAAGTACTGAAATTTCATCATCAATACCTTCATTTGTGTGGTTTCATAACCAAGCAAAATCAATTAGTGCAAGATCTACTACTCATCCATCTGACTCAGATTCTCCGAGAACTCCTCTGAAACTGTTGACTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCCCACAGTACTGAAGAACTTAAGCAAGATGGAGCTGAAAATCAGGTTCCAGCTCAGAAAAAGAAATGGACAGAAAAGGTAAATGTCAGTTTAAAGAGAACAGAATCTGCCCCTTCTCCATCCACGACTAATGATGGAAAAAAGGAAAGTAAGGAAGCTGTTAGACGCAGTTTGTTAGAAGATCTTTGTAAGGAACTTGGCTCAGAGGTAGACACAGAAAACCTGTATGTATTCGAGCAGGATAATCGTCCTGTAGTAGTTGAAAGGGAACAACAAGATGACGGCTCTGAATGCTGCAACAATTACTTTGCGGATGTTAGAGGTCTAAGTGTAAGTACTAGAAGTGAGGGAAATTCACCTATATTTTCTGGCCTAGCTAGTCCTCGTTTGGATGTCAATCGTCGAAACTATTCTGAGAAAAGTAGCATTCCGTATAATTATAATTTGTCCTTTCTTGAAACTGAAATCAATGAAACTGGTTCACCTCTTCCAGTCTCTGATTGTCCTGAGAACTTATCTCACACATCCTCCTTCAACAATGATCCCATGGGAAATTCAGCCTCACATCAGAAGTGGGGAAAGCTGAATAAATTCCAGTGGTTTTTTTCAAGGCTTGGACGAAACAGTGATGAACGTACATCTGTCAAGGGTGGAAGTCCTTCTCAAGATGCAAAACCTGCCAAATGCAAAAATCAAAGTCATGTAATGATACCCTCTTCTTCTATAGCAAATGGGCATTGTAGTCCTGTTAGAAGCCAAGGGGATTCTCCGATAGACCAGAATATGGTCGGAACTATTAGGAATATTGGGCAGTCTATGCTTGAGCATATTCAGGTGATTGAGTCTTCTTTCCAACAAGAACAGGGAGCTTCGAAAGATGTTGTGGTTGGTAAAGGGCAGCTTGCTGCCATGACAGCAGCTCTGGATGAACTTCGGAAAATTAGTAATCTTTTGTCTGAGATCTCATTAGTTCCAGAGTGTTAG 2466 0.4266 MPPAMVLSPLPESPSVLSVPESPPETRRFGDIRGLQWRISLGVLPSSNSIDDLRRATANSRRRYANLRGRLLVDPHLPKDGGSPPNLIMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGGYFQTPGFQGLLRRILLLWCLKHPECGYRQGMHELLAPLLYVLQVDVEHLSAIRKLYEDHFTDRFDGLFCQENDHRYSFDMRKSTDSEDDIGSCGDALKIQSLDELDPSIRALVLLGDAYGAEGELGVVLSDKFMEHDAYCMFEALMSGAHGSVAMADFFSYSPVAGSNTGLPPVIEASNALYHLLYHVDSSLHSHLVDLGVEPQYFALRWFRVLFGREFSLDNLLIIWDEIFLSDNGKKQKLAEDNTESGFMILQSPRGAFITAMAVAMLLRLRSSLLATENPTICLQRLLNFPEDTDIDKLLAKAKSLQAIALSTEISSSIPSFVWFHNQAKSISARSTTHPSDSDSPRTPLKLLTDSYWEEKWRVAHSTEELKQDGAENQVPAQKKKWTEKVNVSLKRTESAPSPSTTNDGKKESKEAVRRSLLEDLCKELGSEVDTENLYVFEQDNRPVVVEREQQDDGSECCNNYFADVRGLSVSTRSEGNSPIFSGLASPRLDVNRRNYSEKSSIPYNYNLSFLETEINETGSPLPVSDCPENLSHTSSFNNDPMGNSASHQKWGKLNKFQWFFSRLGRNSDERTSVKGGSPSQDAKPAKCKNQSHVMIPSSSIANGHCSPVRSQGDSPIDQNMVGTIRNIGQSMLEHIQVIESSFQQEQGASKDVVVGKGQLAAMTAALDELRKISNLLSEISLVPEC 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g03316 821 MobiDBLite consensus disorder prediction 1 25 - -
Aip01g03316 821 Gene3D - 301 445 - -
Aip01g03316 821 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 95 279 - -
Aip01g03316 821 SMART tbc_4 24 408 IPR000195 -
Aip01g03316 821 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 12 731 - -
Aip01g03316 821 MobiDBLite consensus disorder prediction 703 725 - -
Aip01g03316 821 Pfam Rab-GTPase-TBC domain 111 191 IPR000195 -
Aip01g03316 821 Pfam Rab-GTPase-TBC domain 259 363 IPR000195 -
Aip01g03316 821 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 31 322 IPR035969 -
Aip01g03316 821 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 297 437 IPR035969 -
Aip01g03316 821 MobiDBLite consensus disorder prediction 524 538 - -
Aip01g03316 821 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 12 731 - -
Aip01g03316 821 ProSiteProfiles TBC/rab GAP domain profile. 27 362 IPR000195 -
Aip01g03316 821 MobiDBLite consensus disorder prediction 499 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g03316 Aip-Chr1 136291510 136295713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g03316 K18469 - gmx:100816501 1018.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03316 01 136291510 136295713 Aip04g01417 04 27901778 27906216 PCT