Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02803 ATGGAGGAGCATAGTCAATTGAAGCGTGCCATTATTGATTCCTCTGCTGGGGCAATTTCCGGTGGAATTTCAAGGACAGTAACCTCTCCCCTCGATGTTATTAAGATTAGGTTCCAGGTAGTTCAACTAGAGCCCACATCTTCATGGGCTTTACTACGCAAGGATTTTGCTGCACCATCAAAATACACTGGTATATTTCAAGCATCTAAAGATATTTTCAGAGAAGAAGGTTTTCAGGGTTTTTGGCGGGGGAATGTACCGGCATTGCTTATGGTTATGCCATATACAGCTATACAGTTTACAGTTTTACACAAGTTGAAAACTCTTGCCTCTGGTTCTTCCAAGTCAGAGGATCACAGTAGTTTGAGCCCTTATCTGTCCTATGTCAGTGGGGCATTAGCTGGATGTGCAGCTACAATAGGGTCTTACCCGTTTGATCTTCTCCGAACCATATTAGCTTCTCAGGGGGAGCCAAAGGTGTATCCAAACATGAGGTCAGCATATCTTGATATCGTCCAGACTCGGGGATACAAAGGCTTGTATGCTGGATTGTCACCGACGCTAGTTGAGATTATACCTTATGCAGGCCTACAATTTGGCACCTATGATACATTTAAGCGTTGGGCCATGGCTTGGAACCATAGATATTCCAATACCACCACAGGAGGTAACCTGTCTAGCTTCGAACTCTTCGTTTGTGGGTTGGCAGCTGGAACATGTGCAAAACTTGTCTGTCATCCACTTGATGTAGTCAAGAAAAGGTTTCAGATTGAGGGGCTTCAGAGGCATCCAAGATATGGAGCAAGAGTTGAGCTTCATACATACAGGAATATGTCTGATGCCTTGAGCCGGATAATACGGTCGGAAGGTTGGGCCGGTCTATACAAGGGGATACTACCGTCAACCGTTAAAGCCGCACCAGCCGGGGCTGTAACATTTGTTGCATATGAGTTGACTTCTGATTGGCTAGAGTCCCTTTCAACTTGA 987 0.4519 MEEHSQLKRAIIDSSAGAISGGISRTVTSPLDVIKIRFQVVQLEPTSSWALLRKDFAAPSKYTGIFQASKDIFREEGFQGFWRGNVPALLMVMPYTAIQFTVLHKLKTLASGSSKSEDHSSLSPYLSYVSGALAGCAATIGSYPFDLLRTILASQGEPKVYPNMRSAYLDIVQTRGYKGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWAMAWNHRYSNTTTGGNLSSFELFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVELHTYRNMSDALSRIIRSEGWAGLYKGILPSTVKAAPAGAVTFVAYELTSDWLESLST 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02803 328 Pfam Mitochondrial carrier protein 14 110 IPR018108 -
Aip01g02803 328 Pfam Mitochondrial carrier protein 122 209 IPR018108 -
Aip01g02803 328 Pfam Mitochondrial carrier protein 225 323 IPR018108 -
Aip01g02803 328 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 4 325 - -
Aip01g02803 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 322 IPR018108 -
Aip01g02803 328 SUPERFAMILY Mitochondrial carrier 10 317 IPR023395 -
Aip01g02803 328 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Aip01g02803 328 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Aip01g02803 328 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Aip01g02803 328 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Aip01g02803 328 PRINTS Mitochondrial carrier protein signature 181 199 IPR002067 GO:0055085
Aip01g02803 328 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Aip01g02803 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 208 IPR018108 -
Aip01g02803 328 PANTHER SOLUTE CARRIER FAMILY 25 4 325 - -
Aip01g02803 328 Gene3D Mitochondrial carrier domain 5 325 IPR023395 -
Aip01g02803 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 109 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02803 Aip-Chr1 129627980 129630663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02803 1 325 Organic Solute Cotransporters AT3G21390 74.848 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02803 K15108 - gmx:100805353 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02803 01 129627980 129630663 Aip04g01165 04 18284706 18289146 PCT