Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00743 ATGGTGTCTCTCGGTTTCCCACAGTTCCCCTTCCATCTATTTCTGATCATTTCAGGTTTGGGAGTGATATCCACCGTTGAATCAAAGACATATTGGGGTGACGCACAAGTTCTGAAGGAACTAAAGAACAAAATCGACCCCTCTTCTCTGACTCCAGGTTCATGCGTAAGCTCATGGAACTTCACCGTGGACCCATGCGACAACCTCTTCACCGAAAAGTTCACGTGCGGTTTCAGGTGCGACTCGGTTGTTTCCGGTTTAAGCCGAGTCACCGAACTCAGTCTCGACCAGGCGGGTTACTCCGGATCCCTCTCCTCCATCTTCTGGAACCTTCCCTACCTCGAAACCCTCGACGTTTCAAACAACTACTTCTCAGGCCAAATTCCCGAGTCATTTTCAAACCTGACTCGCTTGAGTCGACTCAGTCTTTCGCGAAACTCGTTCACCGGCGAAATTCCCTCTTCCCTTGGCTTCCTCTCCATGCTCGAAGAACTCTACCTGGATAACAACAATCTCGAAGGAACAATCCCTGAGAGTTTCAATAACGGGCTCAAAAGCTTGAAAAGGCTTGAAATTCAGTTCAACAACCTCAACGGAGAACTTCCGAAGAATTTTGATTCTCTCAAAAACCTTAACTACTTAGACCTCAGTGACAATGGCGTCACCGGAAAATTGCCGGAGGCTTTACCGGAGTTTTTGGTTCAGATTTCAATGCGAAACAACGCCTTTAGCGGTTGTTTACAACCCGAGAGCTTCACGAAGCTGAAATATCTTGAGGTTCTTGATTTGAGTTACAACAATTTCAGTGGCTCAGTCCCTTTCAGTCTCTTTCAGATTCCCTCACTGGAGCAACTAACACTCTCTTTCAACAAATTCTCCTCCATGAACTTAGCGTCACGTTACGCATTGGACTACTTGCAAAGCGGACTCATAGCGGTTGATCTGAGCAACAACGAGATTGAGGGGTTCTTGCCGATGTTCTTGGCGATGATGCCGAAGCTTGCGTCTTTGTCAATGGAGAACAACAAGTTGAGTGGTATGATACCGACTCAGTTTGCATTGAAGACGGTTTTGCCTGAACCGGGGGTTTCGCCATTTGAGAGGCTTCTGTTGGGAGGGAATTTCTTGTTTGGAGGTATACCGAGTCCTCTAATGGCGCTTAAACCGGGTTCTGCGAATGTGAGGCTTGTCGGTAATTGCTTGTATCGGTGTCCTCTTATCTTCTTTTTCTGTCAGGGTGGCAAGCAAAAATCGTATCAAGAATGTAAGAGATTCGGACACTTCATCCCTTAG 1293 0.4687 MVSLGFPQFPFHLFLIISGLGVISTVESKTYWGDAQVLKELKNKIDPSSLTPGSCVSSWNFTVDPCDNLFTEKFTCGFRCDSVVSGLSRVTELSLDQAGYSGSLSSIFWNLPYLETLDVSNNYFSGQIPESFSNLTRLSRLSLSRNSFTGEIPSSLGFLSMLEELYLDNNNLEGTIPESFNNGLKSLKRLEIQFNNLNGELPKNFDSLKNLNYLDLSDNGVTGKLPEALPEFLVQISMRNNAFSGCLQPESFTKLKYLEVLDLSYNNFSGSVPFSLFQIPSLEQLTLSFNKFSSMNLASRYALDYLQSGLIAVDLSNNEIEGFLPMFLAMMPKLASLSMENNKLSGMIPTQFALKTVLPEPGVSPFERLLLGGNFLFGGIPSPLMALKPGSANVRLVGNCLYRCPLIFFFCQGGKQKSYQECKRFGHFIP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00743 430 SUPERFAMILY L domain-like 70 412 - -
Aip01g00743 430 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Aip01g00743 430 Pfam Leucine rich repeat 247 292 IPR001611 GO:0005515
Aip01g00743 430 SMART LRR_typ_2 159 182 IPR003591 -
Aip01g00743 430 SMART LRR_typ_2 255 279 IPR003591 -
Aip01g00743 430 SMART LRR_typ_2 331 354 IPR003591 -
Aip01g00743 430 SMART LRR_typ_2 184 207 IPR003591 -
Aip01g00743 430 SMART LRR_typ_2 111 134 IPR003591 -
Aip01g00743 430 SMART LRR_typ_2 208 232 IPR003591 -
Aip01g00743 430 Gene3D Ribonuclease Inhibitor 33 197 IPR032675 -
Aip01g00743 430 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 12 427 - -
Aip01g00743 430 Pfam Leucine Rich repeat 209 223 IPR001611 GO:0005515
Aip01g00743 430 Gene3D Ribonuclease Inhibitor 198 301 IPR032675 -
Aip01g00743 430 Gene3D Ribonuclease Inhibitor 302 402 IPR032675 -
Aip01g00743 430 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 12 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00743 Aip-Chr1 12668540 12670207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00743 64 384 Receptor kinase-like Gene Family AT1G08590 33.531 1.30e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00743 - - adu:107478747 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00873 05 11897594 11899138 Aip01g00743 01 12668540 12670207 PCT