Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00682 ATGAGAGTGAGGGAGAAGGGAGAAGGGATTTGGGCATTTGGTGTCAGCGATGATGCGGTGGTCAAACCCGTCGCTGCTGTGGCTGCGGGATGCGGTGGCGGTGCTCGATTGGTGGTGGTGGCTATGCGATGGCGAAGAGTTGCTTCTAGCTGCTCATTTCAAATGTTTTTAGGTCGATTCTTGCAGAAGAAATTTCGATATGGTTCTTCACTTAGTAGAATTTCTTCCATTAAGATCGCACTGCATTCTGGTGGATGTGGAAGTGTTCAGAATTTTTACCATAGAAGTTCACTTGGGTGTTGTTGGCTTAATCTAAAGACTTTAAGAGAGATTTCACATCATGAGGCAAGAATGCAAACAATAACAAAACAATTTTCTACAAACAGTGAAGAAGATGTGGTTGATGTTTTGGTCCCTCCATTGGCAGAATCTATTTCTGATGGAACTTTAGCCAAGTTCTTAAAGAATCCAGGTGATAGTGTTAGTGTTGATGAAACAATAGCTCAAATAGAAACAGATAAGGTTACAATTGATGTTCCTAGTCCAACAACAGGCATAATTCTAAAGCTTGTAGTCAACGAAGGTGATACAGTTAAACCAGGTCACAAGGTAGCTATTATTTCAACTTCTGCTGAAGTGATAGAGCAGGATTCGTCGTCGTCGTCGTCTTCTTCATCTTCATCTTCATCTTCATCTTCATCTGAGAGTGAATCCGAAGAAGATTCTCCTCAACCAGGCCAAAAGATCAGTGAGAAGAAAAAAGCACCTAATGTTGAGGCTACACCTAAAAGAATTGAGACTTCAGTTACCACTAAGGAAAGTCCTAAAGCAAACATTGCTCCACAACTTCCACCCAACAAAGGAGAAAGACGAGTTCCCATGACAAGACTTCGAAAGCGAGTTATGACACGGTTGAAGGATTCACAAAACACATATGCAATGCTAACAACTTTCAATGAACTTGACATGACTAATCTGATGAAGCTTCGTTCTGATTACAAGGAAGTATTTGTTGAAAAGCATGGAGTCAAATTGGGACTTATGTCTTGTTTTATCAAAGCTGCTATTAGTGCACTCCAACATCAGCCAATTGTAAATGCAGTCATTGATGGTGATGATATTGTATACAGAGATTATATAGATATCAGTGTAGCTGTTGCTACTGCAAAGGGACTTGTTGTGCCAGTTATCCGCAATGCTGAGAAAATGAAGTTGGCAGAGATAGAAAATCATATTAGCTCTTTTGGAAAGAAGGCAAACAATGGAACTTTATCAATTGATGAGATGGTTGGAGGCACACTTACAATATCCAATGGTGGTGTTTATGGGAGCCTCTTGAGTACCCCTATTATTAACCCTCCTCAGTCAGCAATCTTGGGTATGCATTCCATCATGAGTCGTCCAATGATGGTTGGGGGTAATATCGTCCCAAGGCCAATGATGTACATTGCTCTAACATATGATCATAGAATAATTGATGGAAGAGAAGCCGTTTATTTTCTACGTCACATCAAGGATATTGTGGAGGATCCTCGTAGATTGCTACTTGACTTATGA 1557 0.4059 MRVREKGEGIWAFGVSDDAVVKPVAAVAAGCGGGARLVVVAMRWRRVASSCSFQMFLGRFLQKKFRYGSSLSRISSIKIALHSGGCGSVQNFYHRSSLGCCWLNLKTLREISHHEARMQTITKQFSTNSEEDVVDVLVPPLAESISDGTLAKFLKNPGDSVSVDETIAQIETDKVTIDVPSPTTGIILKLVVNEGDTVKPGHKVAIISTSAEVIEQDSSSSSSSSSSSSSSSSSESESEEDSPQPGQKISEKKKAPNVEATPKRIETSVTTKESPKANIAPQLPPNKGERRVPMTRLRKRVMTRLKDSQNTYAMLTTFNELDMTNLMKLRSDYKEVFVEKHGVKLGLMSCFIKAAISALQHQPIVNAVIDGDDIVYRDYIDISVAVATAKGLVVPVIRNAEKMKLAEIENHISSFGKKANNGTLSIDEMVGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIMSRPMMVGGNIVPRPMMYIALTYDHRIIDGREAVYFLRHIKDIVEDPRRLLLDL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00682 518 Gene3D - 128 233 - -
Aip01g00682 518 SUPERFAMILY CoA-dependent acyltransferases 288 517 - -
Aip01g00682 518 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 287 516 IPR001078 GO:0016746
Aip01g00682 518 MobiDBLite consensus disorder prediction 213 290 - -
Aip01g00682 518 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX 1, MITOCHONDRIAL-RELATED 42 518 - -
Aip01g00682 518 MobiDBLite consensus disorder prediction 263 277 - -
Aip01g00682 518 ProSiteProfiles Biotinyl/lipoyl domain profile. 133 208 IPR000089 -
Aip01g00682 518 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 42 518 - -
Aip01g00682 518 SUPERFAMILY Single hybrid motif 133 221 IPR011053 -
Aip01g00682 518 Gene3D - 274 514 IPR023213 -
Aip01g00682 518 Pfam Biotin-requiring enzyme 136 207 IPR000089 -
Aip01g00682 518 MobiDBLite consensus disorder prediction 213 240 - -
Aip01g00682 518 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 158 187 IPR003016 -
Aip01g00682 518 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 134 517 IPR006255 GO:0004149|GO:0006099|GO:0045252
Aip01g00682 518 CDD lipoyl_domain 134 207 - -
Aip01g00682 518 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00682 Aip-Chr1 10949723 10960728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00682 135 516 Acyl Lipid Metabolism Gene Families AT1G54220 26.107 2.03e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00682 K00658 - gmx:100813488 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g00296 07 2704910 2709309 Aip01g00682 01 10949723 10960728 ECH
Aip01g00682 01 10949723 10960728 Aip01g00682 01 10949723 10960728 ECH