Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2405 ATGCCCTTCATTATTCTCTCTTCTTCACAACCTTCTTTGTTGACCGCCAAAGCCCTAAAACCTTCGATTCACGCCATGAAGGACCGCCCTACGCTGTCCTCTTATGGCGCCATTTACGTTCCCCCGCACCACCGCCTCCGCTCCGTCATCACTTCCGCCAATTACAACTCCTCCGCTCCCTCTGTAGCCAAGCTCCGCGATCACCGTGGTGCAGCTCTAAACCCTAGACCCGTTGCTTCAGCTGCTCCTACCACTGTGCATCGCTCGCAAACGACGTTGCCGGAGCAAATTCCTGACAAGGGGAATTCGCGCTTTGTTTCAGCTTACGACGACGTGGTTTCCGAGGAAGGCTCCGATCGTGAATTCGAGGCTCCCTCATTTCGGAGTGCTTCACCAAATGATAATGTTGATGAGTGGAAGAGGAAGCTAACCTTGCTCTTAAACGACAAGAGTAAGCAAGAGTTGTTGTCCAGGGAGAAAAAGGATAGGCGTGATTTTGATCAAATTGCGCTTTTGGCAAGCAGAATGGGGTTGTATAGCCACATGTATGCAAAGGTTGTTGTCTTCAGTAAGGTTCCACTTCCAAACTATAGATATGACTTGGATGATAGGCGGCCGCAGAGGGAGGTGAGCATGCCTATAACTTTGTTAAGGCGAGTTGATGCATACTTTGAGGAACACCTTACCCGAAAGTCCAAGATGAAGGAAAGCTTTTCAGATGTATCATTTACAAGATCAAGCAGTAACAGTAGTATTGGTACAGATGAAGGGCTTTTTGAGCACCCTGAGCCACTTGCATCTAGTAAGGCTGTTGGGGAGAAAATACTTAGGCGGAGGAGCTTGCAAATGCATGATCAGCAGCAAGCATGGCAGGAATCTCCAGAAGGAAGAAGAATGCTAGAATTTCGCAGGAGTCTCCCTGCTTATAAAGAGAAAGAAGCAATATTGTCTCTCTTATCAAGAAATCAGGTAGTTGTCATCTCAGGCGAAACAGGTTGTGGCAAGACAACTCAAATTCCACAGTTTATTTTAGAATCTGAGATAGAATCAGTTCGAGGAGCTGCTTGTAATATCATATGCACACAACCAAGACGCATATCAGCTATGTCTGTTTCTGAAAGGGTTGCCTACGAGAGAGGGGAGAAATTGGGTGAATCTGTTGGATATAAAGTTCGATTGGAGGGTATGAAGGGGAGAGATACCCATCTTCTCTTTTGCACCACGGGCATCTTATTAAGAAGATTGCTAGCTGATAGAAACTTAACAGGTGTAACTCATGTTATCGTGGATGAAATTCATGAGCGTGGCATGAATGAAGATTTTCTGCTTATCGTCCTTAAAGATCTCCTTCCGCACCGACCTGAAATGAAACTGATTTTGATGAGTGCTACCCTAGATTCAGAGCTCTTCTCTTCTTACTTTAATGGGGCACCAGTTATGAATATTCCGGGCTTCACATATCCCGTTAGAACTCATTTTTTGGAGGACATTCTTGAAATGACGGGCTACAGATTGACAACTTCTAATCAAATTGATGATTATGGTCAAGAAAGGATGTGGAAAATGAACAAACAGGTCCCAAGAAAGAGGAAAAGCCAAATTGCTTATGTTGTCGAGGATGCTATTAGAGCTGCTGATTTCAAAGATTACAGCCCACAGACACAGGAGTCTTTGTTGTGTTGGAATCCTGATTGTATTGGATTTAGTCTCATAGAATATATCCTATGCATGATATGTGAGAATGAAAGGCCTGGTGCTGTTTTAGTTTTTATGACTGGATGGGATGATATAAGCACTTTGAAAGAGAAGTTTTTGGCTCATCCTGTCTTAGGAGATCCAAATCGAGTTTTGTTGCTTACCTGTCATGGCTCAATGGGCAGTTCAGAACAGAGGTTAATATTTGAAGAACCCAAAGATGGAGTAAGAAAAATAGTGCTTGCAACAAATATCGCTGAAACGAGTATCACAATAAATGACGTTGTTTTTGTGCTTGACTGCGGAAAAGCAAAAGAAACATCATATGATGCACTGAATAACACGCCCTGTTTGCTTCCAACATGGATCTCTAAGGTTTCTGCCCAACAGAGACGAGGAAGAGCTGGTCGTGTTCAACCTGGAGTGTGTTACCATATCTATCCTAGATGTGTATATGATGCATTTGCTGAGTATCAATTGCCAGAAATTTTGAGGACACCCTTGCAATCTCTGTGTCTGCAAATAAAAAGTCTAAGACTTGGAAGCATACCTGAGTTCTTGTCTAGGGCTTTGCAGTCTCCGGAGATCCTTGCGGTACAAAATGCTATTGAGTATTTGAAAATAATTGGGGCTTTGGATGAGAATGAGAATTTGACTACTCTAGGGTCCTATCTGACAATGCTTCCCATGGAACCCAAACTTGGCAAGATGCTTATATTAGGGGCTATCTTCAATTGCCTGGATCCAATATTAACTGTGGCTGCTGGTCTTAGTGTGAGAGATCCTTTCCTAACACCACTGGACAAAAAAGACCTTGCAGAGGCAGCAAAATCTCAGTTTGCTGGAGCATATAGTGACCACCTTGCACTTATAAAGGCTTACGAGGGTTGGAAAGATGCAGAATTAGACATGGGAGGATGTGAATATTGCTGGAAAAATTTTCTTTCAGCACAATCAATGAAAGCTATTGATGCTCTTAGGAGAGAGTTCAGATGCCTGCTCAAGGATATTGGATTAGTTGATAGCAATACAGCCAACTGCAACTTGTGGAGCTGTGATGTGAATCTTATCCGGGCAGTTATTTGCTATGGTCTATATCCTGGAATTTGCGCTGTTGTGCACAATGAAAAGTCATTCTCTTTGAAAACAATGGAGGATGGTCAAGTGCTCCTATATTCGAACTCCGTCAATGCTCGGGAAACTAGAATTCCATATCCATGGTTACTTTTTAATGAGAAGATAAAAGTGAACTCTGTTTTCCTCCGCGACTCAACAGCTGTGCCTGATGCAGTGGTGCTTCTGTTTGGTGGAAACTTATTGAAAGGGGATGCTGATGGCCACCTAAAAATGTTGGGAGGATATCTGGAGTTCTTCATGGAACCTCCTGTTGCTGATCTGTACCAGTGTGTAAAGAGAGAACTTGATGACTTAATTCAAAGAAAACTACTTTTTCCAAAGATGAGCATACACTTGTATGATGAACTCCTATCAGCAGTGCGGTTGCTGATTTCCATAGACACATGTGAAGGCAAATTTGTATTTGGTCGTCGGGTCTTTAAACCAGCAAAGTCAACAGTGATGGCCACATCACATCCAGCATCGATTTCAAGGACTGAGAGTGGCCCTGGGGGTGATAATTCTAAAAGTCAGCTCCAGACCTTACTCACAAGAGCAGGATATGCTGCACCCAGCTACAAGACTAAACAATTGAAGAATAATCAGTTTCGGGCTACAGTTGAGTTCAATGGAATGCAGATAATGGGCCAACCCTGTAGCAATAAGAAAAGTGCAGAAAAAGATGCTGCAGCTGAGGCCTTGCAGTGGCTGATGGGTGGAAAACAGTCAGGCAGTGAGTATATCAGTCACATGTCCAAGTTGCTAAAGAAAAGTAAGAAGGATCACAGCTGA 3603 0.4333 MPFIILSSSQPSLLTAKALKPSIHAMKDRPTLSSYGAIYVPPHHRLRSVITSANYNSSAPSVAKLRDHRGAALNPRPVASAAPTTVHRSQTTLPEQIPDKGNSRFVSAYDDVVSEEGSDREFEAPSFRSASPNDNVDEWKRKLTLLLNDKSKQELLSREKKDRRDFDQIALLASRMGLYSHMYAKVVVFSKVPLPNYRYDLDDRRPQREVSMPITLLRRVDAYFEEHLTRKSKMKESFSDVSFTRSSSNSSIGTDEGLFEHPEPLASSKAVGEKILRRRSLQMHDQQQAWQESPEGRRMLEFRRSLPAYKEKEAILSLLSRNQVVVISGETGCGKTTQIPQFILESEIESVRGAACNIICTQPRRISAMSVSERVAYERGEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRNLTGVTHVIVDEIHERGMNEDFLLIVLKDLLPHRPEMKLILMSATLDSELFSSYFNGAPVMNIPGFTYPVRTHFLEDILEMTGYRLTTSNQIDDYGQERMWKMNKQVPRKRKSQIAYVVEDAIRAADFKDYSPQTQESLLCWNPDCIGFSLIEYILCMICENERPGAVLVFMTGWDDISTLKEKFLAHPVLGDPNRVLLLTCHGSMGSSEQRLIFEEPKDGVRKIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVQPGVCYHIYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSIPEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTTLGSYLTMLPMEPKLGKMLILGAIFNCLDPILTVAAGLSVRDPFLTPLDKKDLAEAAKSQFAGAYSDHLALIKAYEGWKDAELDMGGCEYCWKNFLSAQSMKAIDALRREFRCLLKDIGLVDSNTANCNLWSCDVNLIRAVICYGLYPGICAVVHNEKSFSLKTMEDGQVLLYSNSVNARETRIPYPWLLFNEKIKVNSVFLRDSTAVPDAVVLLFGGNLLKGDADGHLKMLGGYLEFFMEPPVADLYQCVKRELDDLIQRKLLFPKMSIHLYDELLSAVRLLISIDTCEGKFVFGRRVFKPAKSTVMATSHPASISRTESGPGGDNSKSQLQTLLTRAGYAAPSYKTKQLKNNQFRATVEFNGMQIMGQPCSNKKSAEKDAAAEALQWLMGGKQSGSEYISHMSKLLKKSKKDHS* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2405 1200 Pfam Helicase associated domain (HA2) 767 840 IPR007502 GO:0004386
Ahy9g2405 1200 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 570 744 IPR001650 -
Ahy9g2405 1200 Gene3D - 746 852 - -
Ahy9g2405 1200 SMART ha2_5 766 856 IPR007502 GO:0004386
Ahy9g2405 1200 Gene3D - 1087 1179 - -
Ahy9g2405 1200 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1111 1176 IPR014720 -
Ahy9g2405 1200 CDD DEXHc_RHA-like 322 482 - -
Ahy9g2405 1200 MobiDBLite consensus disorder prediction 239 255 - -
Ahy9g2405 1200 Pfam Double-stranded RNA binding motif 1112 1174 IPR014720 -
Ahy9g2405 1200 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 93 1122 - -
Ahy9g2405 1200 PANTHER ATP-DEPENDENT RNA HELICASE 93 1122 - -
Ahy9g2405 1200 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 922 1003 IPR011709 -
Ahy9g2405 1200 Pfam DEAD/DEAH box helicase 313 467 IPR011545 GO:0003676|GO:0005524
Ahy9g2405 1200 Pfam Helicase conserved C-terminal domain 571 703 IPR001650 -
Ahy9g2405 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 872 IPR027417 -
Ahy9g2405 1200 MobiDBLite consensus disorder prediction 75 102 - -
Ahy9g2405 1200 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 316 483 IPR014001 -
Ahy9g2405 1200 SUPERFAMILY dsRNA-binding domain-like 1107 1184 - -
Ahy9g2405 1200 MobiDBLite consensus disorder prediction 239 261 - -
Ahy9g2405 1200 SMART DRBM_3 1112 1175 IPR014720 -
Ahy9g2405 1200 MobiDBLite consensus disorder prediction 1095 1114 - -
Ahy9g2405 1200 CDD SF2_C_RHA 487 712 - -
Ahy9g2405 1200 Gene3D - 265 484 IPR027417 -
Ahy9g2405 1200 SMART helicmild6 598 704 IPR001650 -
Ahy9g2405 1200 SMART ultradead3 303 497 IPR014001 -
Ahy9g2405 1200 MobiDBLite consensus disorder prediction 83 98 - -
Ahy9g2405 1200 Gene3D - 568 723 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2405 Ahy-Chr9 112869691 112879077 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2405 K14442 - jre:109007771 1835.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3236 19 155521340 155530747 Ahy9g2405 9 112869691 112879077 hybridization