Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2398 ATGGAAGAGAGTCTTCTAGCGGCAAAGGAAAGATCATCATCATGGACATGGAAGAAAGGTTACAAAGAAGAAATGAAGAGGATATGTGAGATAGCAGGGCCCATGGTGGTAGTGATAGCTTCTCAGTATCTGTTGCAGGTGGTTTCAACCATGATGGTTGGTCACCTTGGCGAGCTTGCTCTCTCAAGCTCTTCTTTGGCCATATCCCTCTCTGGTGTCACCGGTTTCAGCCTCCTTATGGGGATGGCGAGTGGACTGGAAACTATATGTGGACAGGCTTATGGAGCAGAACAATACCAAAGAATTGGAATGCAAACATACACTGCCATCTTTTCTCTCATATTGGTGTGTGTTCCCCTCTCTATTCTTTGGATCAACATTGAACAGATACTAGTCTTCCTAGGCCAGGACCCTCTCATTGCTCATGAAGCAGCCAAGTTCATCATATGGCTTATTCCAGCACCTTTTGCATACGCAATTCTGCAGCCGTTAGTTCGATATTTCCAAATCCAAAGCTTGCTTCTTCCCATGCTTGTAAGTTCTTGTGTCACTCTATTCCTCCATATACCTCTTTGTTGGCTCTTGGTGTTCAAGGCTGGACTCAATAGTGCTGGTGGAGCATTAGCAGTTAGCATTTCAATCTGGTGCAATGTCATTTTTCTTGGATTATTCATGAGATACTCTCCATCATGTGCAAAAACACGCGCTCCGATTTCTCTGGAGATGTTCCGAGGAATTGGGGAGTTTTTTCGCTTTGCTGTCCCTTCTGCAGTAATGATTTGCCTTGAATGGTGGTCATATGAGTTGCTTATCTTGCTGTCTGGGCTGTTACCAAACCCACAACTTGAGACTTCAGTTTTATCTGTTTGTCTTAATACAATTTCAACTCTCTATACCATCCCTTTTGGAATTGGTGCTGCAGCAAGCACAAGAGTTTCAAATGAATTAGGAGCAGGGAAACCACTAGCTGCTCGTGTAGCCGTGCTGGCTGGAATGTCTCTTGCAGTAATTGAGACGAGTATAGTAAGCGCAACCCTCTTTTCGTGTCGCCACATTTATGGTTATGTTTTCAGCAACGAGGAGGAAGTTGTTGATTATGTCACTGTCATGGCTCCTCTGGTTTGTGTATCTGTTATACTAGATAGCCTACAAGGTGTTCTGACAGGGATTGCTAGAGGTTGTGGATGGCAGCACTTAGGAGTTTTTGTAAACCTAGGAGCTTTCTACCTCTGTGGGATTCCGGCTGCGGCTGCGTTGGCATTTTGGGTGAATCTGAAAGGAAAAGGACTTTGGATTGGAATACAAGTTGGTGCATTTGTTCAAACTGTTCTACTTGCTACCATTACAAGCTGCATAAATTGGGAACAACAGGCAATCAAGGCAAGGAAGAGAATATTTGATGGTCAATTTTCAGAAGATAATATACTGATATGA 1434 0.4372 MEESLLAAKERSSSWTWKKGYKEEMKRICEIAGPMVVVIASQYLLQVVSTMMVGHLGELALSSSSLAISLSGVTGFSLLMGMASGLETICGQAYGAEQYQRIGMQTYTAIFSLILVCVPLSILWINIEQILVFLGQDPLIAHEAAKFIIWLIPAPFAYAILQPLVRYFQIQSLLLPMLVSSCVTLFLHIPLCWLLVFKAGLNSAGGALAVSISIWCNVIFLGLFMRYSPSCAKTRAPISLEMFRGIGEFFRFAVPSAVMICLEWWSYELLILLSGLLPNPQLETSVLSVCLNTISTLYTIPFGIGAAASTRVSNELGAGKPLAARVAVLAGMSLAVIETSIVSATLFSCRHIYGYVFSNEEEVVDYVTVMAPLVCVSVILDSLQGVLTGIARGCGWQHLGVFVNLGAFYLCGIPAAAALAFWVNLKGKGLWIGIQVGAFVQTVLLATITSCINWEQQAIKARKRIFDGQFSEDNILI* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2398 477 PANTHER PROTEIN DETOXIFICATION 10 464 - -
Ahy9g2398 477 CDD MATE_eukaryotic 24 460 IPR045069 GO:0042910|GO:1990961
Ahy9g2398 477 PANTHER MULTIDRUG RESISTANCE PROTEIN 10 464 - -
Ahy9g2398 477 TIGRFAM matE: MATE efflux family protein 34 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy9g2398 477 Pfam MatE 255 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Ahy9g2398 477 Pfam MatE 34 194 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2398 Ahy-Chr9 112813792 112816728 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2398 K03327 - gmx:100788647 769.615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3243 19 155585246 155588554 Ahy9g2398 9 112813792 112816728 hybridization