Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2131 ATGATAATGGAACCTATTTCCAAGCTAAGCCATGATCCTCTCTTATCAGAGCTTCTCTTCTCAAAACTCTCACACTTCCTTTGGTCTTGTATTCTCCTTCTTGTTGCATCTTCTGAACTGTTCTTACTCTTCCAAAACTCAGAACCAATGTTCCATTTTGTTCTTCTATGCTTCCTCCTTCTCTGTCTCCTTCTAAAGCACATTCTCTCAAGGTCTTCTCCTGTTTACCTTGTTGACTTCTCATGTCTTAAACCGCCGGGATCTTGCAGGGTGCCATTTGCGGCATTCCTTGAAAACGCTTCCATGTTTGAAGTCTTTGACGATGAAAGCTTAGCTTTCATGGCCAAAGTTCTTCAAACTTCTGGTCAAAGCGAAGAGACTTCCCTCCCTCCTTCACTGCACTACATTCCTCCGAAAACAGACCAAAATGAAGCCTTAAGAGAGGTTCACATGGTTCTCTTCCCCATCCTTGACGACCTCTTTGCAAAAACCAATGTTTCACCCCTTGACATAGACATACTCATAGTTAACTGCAGTGGCTTTTGTCCCTCTCCTTCTCTGGCCTCCATTGTCATCAACAAATACTCCATGAGAAGTGACATCAAGAGCTTCAACATCTCCGGCATGGGGTGCAGTGCAAGTGCACTATGCATAGACATGGCACAGAATCTTCTGAGAGTTCACAAGAACTCAAACGCCATTGTTCTCAGCACAGAGATTCTCTCAACAGGTTGGTATTCAGGGAACGAAAAGTCAAAGTTGGTCATCAACTGCCTCTTCAGGATGGGAAGCGCCGCCATTCTTCTCTCGAACAAGAAAGAAGCAAGAAAGCACGCAAAATACAAGGTGCTTAGGACGCTAAGAACACAAAGAGCCTTCGAAGATAAAGCTTATGTTTCTGCCATAAGAGAAGAAGATTCAGAAGGGAAGCTGGGAGTTACCCTGAAGAGGGACTTGCTTCAAGTAGCCGGTGAAACCCTTCGTTCAAACATCACGATTCTTGGCTCTGAGATCTTGCCTTTGTCTGAGAAGTTTCGGTATTTTGCTTCCCTGATGAAGAAGAGGTTCTTGTTGACAAAGTCTGAAGGGATCTACGTTCCGAACTTCAAGACAGTGATACAGCATTTCTGCATGCCGTGTTCGGGGAGGTCAGTAATCATGGAAGTGGGGAAAGGCTTGAAGCTTGGGGAGAGAGAGATGGAACCGGCATTGATGACTCTTCACAGGTTCGGGAACCAGTCTTCTTCATCTCTCTGGTACGAACTTGCTTACTTGGAAGCCAAGGAACGGGTTCACAAAGGTGACAGAATATGGCAACTCGGTATGGGTAGTGGGCCCAAATGCAACAGTGTTCTCCTCCAATGTGTCAGGCCCATCATTGCTGAGTCCAACAAGGGCCCATGGGCTGACTGCATCCATCGATACCCCATATGGGTTAATGATTCTTCAACACCTTAG 1458 0.4568 MIMEPISKLSHDPLLSELLFSKLSHFLWSCILLLVASSELFLLFQNSEPMFHFVLLCFLLLCLLLKHILSRSSPVYLVDFSCLKPPGSCRVPFAAFLENASMFEVFDDESLAFMAKVLQTSGQSEETSLPPSLHYIPPKTDQNEALREVHMVLFPILDDLFAKTNVSPLDIDILIVNCSGFCPSPSLASIVINKYSMRSDIKSFNISGMGCSASALCIDMAQNLLRVHKNSNAIVLSTEILSTGWYSGNEKSKLVINCLFRMGSAAILLSNKKEARKHAKYKVLRTLRTQRAFEDKAYVSAIREEDSEGKLGVTLKRDLLQVAGETLRSNITILGSEILPLSEKFRYFASLMKKRFLLTKSEGIYVPNFKTVIQHFCMPCSGRSVIMEVGKGLKLGEREMEPALMTLHRFGNQSSSSLWYELAYLEAKERVHKGDRIWQLGMGSGPKCNSVLLQCVRPIIAESNKGPWADCIHRYPIWVNDSSTP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2131 485 PANTHER 3-KETOACYL-COA SYNTHASE 15 478 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy9g2131 485 Pfam FAE1/Type III polyketide synthase-like protein 69 355 IPR013601 GO:0006633|GO:0016020|GO:0016747
Ahy9g2131 485 PANTHER 3-KETOACYL-COA SYNTHASE 15 478 - -
Ahy9g2131 485 Gene3D - 99 455 IPR016039 GO:0016746
Ahy9g2131 485 CDD CHS_like 71 453 - -
Ahy9g2131 485 SUPERFAMILY Thiolase-like 260 457 IPR016039 GO:0016746
Ahy9g2131 485 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 373 454 IPR013747 -
Ahy9g2131 485 SUPERFAMILY Thiolase-like 65 276 IPR016039 GO:0016746
Ahy9g2131 485 PIRSF Very_long_ch_3-ktacl-CoA_syn 12 484 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2131 Ahy-Chr9 110218152 110220135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g2131 50 479 Miscellaneous Gene Families AT1G25450 47.907 3.07e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2131 K15397 - gmx:100818350 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3504 19 157724575 157726421 Ahy9g2131 9 110218152 110220135 hybridization