Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3504 ATGATAATGGAACCTATTTCCAAGCCAAGCCATGATCCTCTCTTATCAGAGCTTCTCTTCTCAAAACTCTCACACTTCCTTTGGTCTTGTATTCTCCTTCTTGTTGCATCTTCTGAACTGTTCTTACTCTTCCAAAACTCAGAACCAATGTTCCATTTTCTTCTTCTATGCTTCCTCCTTCTCTGTCTCCTTCTAAAGCACATTCTCTCAAGGTCTTCTCCTGTTTACCTTGTTGACTTCTCATGTCTTAAACCGCCGGGATCTTGCAGGGTGCCATTTGCGGCATTCCTTGAAAACGCTTCCATGTTTGAAGTCTTTGACGATGAAAGCTTAGCCTTCATGGCCAAAGTTCTTCAAACTTCTGGTCAAAGCGAAGAGACTTCCCTCCCTCCTTCACTGCACTACATTCCTCCGAAAACAGACCAAAATGAAGCCTTAACAGAGGTTCACATGGTTCTCTTCCCCATCCTTGATGACCTCTTTGCAAAAACCAATGTTTCACCCCTTGACATAGACATACTCATAGTTAACTGCAGTGGCTTTTGTCCCTCTCCTTCTCTGGCCTCCATTGTCATCAACAAATACTCCATGAGAACTGACATCAAGAGCTTCAACATCTCCGGCATGGGGTGCAGTGCAAGCGCACTATGCATAGACATGGCACAGAATCTTCTGAGAGTTAACAAGAACTCAAACGCCATTGTTCTCAGCACAGAGATTCTCTCAACAGGTTGGTATTCAGGGAACGAAAAGTCAAAGTTGGTCATCAACTGCCTCTTCAGGATGGGAAGCGCCGCCATTCTTCTCTCGAACAAGAAAGAAGCAAAGAAGCACGCAAAATACAGGGTGCTTAGGACGCTAAGAACACAAAGAGCCTTCGAAGACAAAGCTTATGTTTCTGCCATAAGAGAAGAAGATTCAGAAGGGAAGCTGGGAGTTACCCTGAAGAGGGACTTGCTTCAAGTAGCCGGTGAGACCCTTCGTTCAAACATCACGATTCTTGGCTCTGAGATCTTGCCTTTGTTTGAGAAGTTTCGGTATTTTGCTTCCCTGATGAAGAAGAGGTTCTTGTTGACAAAGTCTGAAGGGATCTACGTTCCGAACTTCAAGACGGTGATACAGCATTTCTGCATGCCGTGTTCTGGGAGGTCAGTAATCATGGAAGTGGGGAAAGGCTTGAAGCTTGGGGAGAGAGAGATGGAACCGGCATTGATGACTCTTCACAGGTTCGGGAACCAGTCTTCTTCATCTCTCTGGTACGAACTTGCTTACTTGGAAGCCAAGGAACGGGTTCACAAAGGTGACAGAATATGGCAACTCGGTATGGGTAGTGGGCCCAAATGCAACAGTGTTCTCCTCCAATGTGTCAGGCCCATCATTGCTGAGTCCAACAAGGGCCCATGGGCTGACTGCATCCATCGATACCCCTTATGGGTTAATGATTCTTCAACACCTTAG 1458 0.4588 MIMEPISKPSHDPLLSELLFSKLSHFLWSCILLLVASSELFLLFQNSEPMFHFLLLCFLLLCLLLKHILSRSSPVYLVDFSCLKPPGSCRVPFAAFLENASMFEVFDDESLAFMAKVLQTSGQSEETSLPPSLHYIPPKTDQNEALTEVHMVLFPILDDLFAKTNVSPLDIDILIVNCSGFCPSPSLASIVINKYSMRTDIKSFNISGMGCSASALCIDMAQNLLRVNKNSNAIVLSTEILSTGWYSGNEKSKLVINCLFRMGSAAILLSNKKEAKKHAKYRVLRTLRTQRAFEDKAYVSAIREEDSEGKLGVTLKRDLLQVAGETLRSNITILGSEILPLFEKFRYFASLMKKRFLLTKSEGIYVPNFKTVIQHFCMPCSGRSVIMEVGKGLKLGEREMEPALMTLHRFGNQSSSSLWYELAYLEAKERVHKGDRIWQLGMGSGPKCNSVLLQCVRPIIAESNKGPWADCIHRYPLWVNDSSTP* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3504 485 PANTHER 3-KETOACYL-COA SYNTHASE 15 477 - -
Ahy19g3504 485 PIRSF Very_long_ch_3-ktacl-CoA_syn 15 484 IPR012392 GO:0006633|GO:0016020|GO:0016747
Ahy19g3504 485 Pfam FAE1/Type III polyketide synthase-like protein 69 355 IPR013601 GO:0006633|GO:0016020|GO:0016747
Ahy19g3504 485 SUPERFAMILY Thiolase-like 260 457 IPR016039 GO:0016746
Ahy19g3504 485 Gene3D - 99 455 IPR016039 GO:0016746
Ahy19g3504 485 CDD CHS_like 71 453 - -
Ahy19g3504 485 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 373 454 IPR013747 -
Ahy19g3504 485 SUPERFAMILY Thiolase-like 65 275 IPR016039 GO:0016746
Ahy19g3504 485 PANTHER 3-KETOACYL-COA SYNTHASE 15 477 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3504 Ahy-Chr19 157724575 157726421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g3504 50 479 Miscellaneous Gene Families AT1G25450 46.977 4.48e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3504 K15397 - gmx:100818350 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3504 19 157724575 157726421 Ahy19g3504 19 157724575 157726421 ECH
Ahy19g3504 19 157724575 157726421 Ahy9g2131 9 110218152 110220135 hybridization