Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2048 ATGGCAATGGCTTCTCCACTTTCCACTTCAAGCGTGTTGTGCTGGAAATTGAAGGGCACAGGTAGTGGCGCAGTCGCAGTGTGTGCAAAGTCGAATTTGGTCGATTTGTCACGATGGTGTGGTTTGAAGCATGTGGGCATGTCAGCTACGCCGAAGCCCCTTGTTATGAGAGGTAAAAAGGGGTTGTGGAAAGGCAAGGTGGTGTACGCGTCTCTGTTTGGAGTTGGAGCTCCTGAAGCGCTGGTTATTGGGGTGGTTGCTCTATTGGTTTTCGGTCCAAAAGGTCTTGCGGAGGTTGCTCGAAATCTGGGCAAAACGCTGCGTGCATTCCAACCCACAATTAGAGAACTTCAGGATGTTTCCAGGGAGTTTAAGACCACACTGGAACGGGAGATCGGTCTTGACGACATTTCAACTCCACCAACAAAGACCACCTACAATTCTACTCTTGACCCTAATGGCACAAGAGATCCAAGCAAACCCTACAGCTCTGAGGAGTCTAAAGAAGCCATCCTGCCTCCTCCTGCAACTGCTACGGAGCCACAGCCTCAGAAGCCAGAAACTGACAACTCGCCTCTCGATTCTTCAAGTCAATAG 597 0.5025 MAMASPLSTSSVLCWKLKGTGSGAVAVCAKSNLVDLSRWCGLKHVGMSATPKPLVMRGKKGLWKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDDISTPPTKTTYNSTLDPNGTRDPSKPYSSEESKEAILPPPATATEPQPQKPETDNSPLDSSSQ* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2048 198 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 5 166 - -
Ahy9g2048 198 MobiDBLite consensus disorder prediction 138 160 - -
Ahy9g2048 198 Pfam mttA/Hcf106 family 75 125 IPR003369 GO:0015031
Ahy9g2048 198 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 74 119 IPR006312 GO:0016021|GO:0043953
Ahy9g2048 198 PRINTS Bacterial sec-independent translocation TatB protein signature 72 92 - -
Ahy9g2048 198 PRINTS Bacterial sec-independent translocation TatB protein signature 92 111 - -
Ahy9g2048 198 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 5 166 - -
Ahy9g2048 198 MobiDBLite consensus disorder prediction 133 198 - -
Ahy9g2048 198 MobiDBLite consensus disorder prediction 182 198 - -
Ahy9g2048 198 Gene3D - 72 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2048 Ahy-Chr9 108997139 108998382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2048 - - adu:107466978 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3577 19 158412917 158414075 Ahy9g2048 9 108997139 108998382 hybridization