Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g3577 ATGGCAATGGCTTCTCCACTTTCCACTTCAAGCGTGTTGTGCTGGAAATTGAAGGGCACAGGTAGTGGCGCAGTCGCAGTGTGTGCGAAGTCGAATTTGGTGGATTTGTCACGATGGTGTGGTTTGAAGCATGTGGGCATGTCAGCTACGGCGAAGCCCCTTGTTATGAGAGGTAAAAAAGGCAAGGTGGTGTACGCGTCTCTGTTTGGAGTTGGAGCTCCTGAAGCGCTGGTTATTGGGGTGGTTGCTCTATTGGTTTTCGGTCCAAAAGGTCTTGCGGAGGTTGCTCGAAATCTGGGCAAAACGCTTCGTGCATTCCAACCCACAATTAGAGAACTTCAGGATGTTTCCAGGGAGTTTAAGACCACACTGGAACGGGAGATCGGTCTTGACGACATTTCAACTCCACCAAAACAGACCACCTACAATTCTACTCTTGACCCTAATGGCACAAGAGATCCAAGCAAAGCCTACAGCTCTGAGGAGTCTAAAGAAGCCATCCTGCCTCCTCCTGCAACTGCTACGGAGCCACAGTCTCAGAAGCCAGAAACTGACAACTCGCCTCTCGATTCTTCAAGTCAATAG 585 0.4991 MAMASPLSTSSVLCWKLKGTGSGAVAVCAKSNLVDLSRWCGLKHVGMSATAKPLVMRGKKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDDISTPPKQTTYNSTLDPNGTRDPSKAYSSEESKEAILPPPATATEPQSQKPETDNSPLDSSSQ* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g3577 194 MobiDBLite consensus disorder prediction 134 156 - -
Ahy19g3577 194 Pfam mttA/Hcf106 family 71 121 IPR003369 GO:0015031
Ahy19g3577 194 MobiDBLite consensus disorder prediction 128 194 - -
Ahy19g3577 194 MobiDBLite consensus disorder prediction 173 194 - -
Ahy19g3577 194 PRINTS Bacterial sec-independent translocation TatB protein signature 88 107 - -
Ahy19g3577 194 PRINTS Bacterial sec-independent translocation TatB protein signature 68 88 - -
Ahy19g3577 194 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 5 163 - -
Ahy19g3577 194 Gene3D - 68 116 - -
Ahy19g3577 194 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 5 163 - -
Ahy19g3577 194 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 70 115 IPR006312 GO:0016021|GO:0043953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g3577 Ahy-Chr19 158412917 158414075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g3577 - - adu:107466978 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3577 19 158412917 158414075 Ahy19g3577 19 158412917 158414075 ECH
Ahy19g3577 19 158412917 158414075 Ahy9g2048 9 108997139 108998382 hybridization