Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g2018 ATGGAGAACATGCAGTACGCGGAGGAGCTGGTTCGGGAGTTCCTCGTCTTCCGAGGCTTCACCAACACTCTCCAATCCTACGACTCTGAGCTCCGAACCGATCTTGGAAAGGGCTTCCACGTCGATAAGATCCTCGACCTCATCTTCTCCCTCTACGTTCCCAAATTCCAAGCCGATAGGCTCGTTGCCCTCCTCTCCTTCTTTAAGCACTACCTCTCCTCTTCTTCCGAAACCGCACTCCTTTCTACGCTCTCCAAAATCCAAACTTCTCTTCTCCGCTTCTACGTCGTTCACGCCTTGCAAGCCAATCGCAGGGACAGAGTCATCGACTTCTTCGCTGTCCATGGCAGTGACCTCTTGCAACGCTCACAGGATTGGACTCGCTGGTTCGCGATTCCTTATGTTAAGAATCCGAACCAGGATCCTGAATTTCGGGTTTATTTCTCCAAGGAGTGGTATGAGGCCTTGCATCTTTCTGTCAGAAACTTCTTTAGCGAGATATTCAATGGAACTCGGCTACCTGCACTGCTGAAGATCAGTTCAGAGATGAATGCCACCAACGTACTCAAAAGAGATATCCTAAATCTGAATATTAAATTGGCAGAGCTTCAGGCTTTGCTTGATGAGAAAGAAGCGAAGTTATCACACTATAGGAGTATGGAAGGAAGCATTAGTTCATTGAGCAATTTGCGGGAGGAAAGTTCTCAGATGTCAAGAGGTTTTCCAGAGGTTTCCCCAACTGCTGTTCCACGAGCAGTTCAAACAGAAATTAACCAAGATTCAGTTGTGAATGGAGCTGCAAATATTCAGTCTGAGTATGTCAATTCCAAGTCAGGTGATAATTCAACTGGGGCATTGAATGATCGTGTTGGAAATGATGGATCAGGCGATACCATGCAAACAGTTCATGAAAGTCCAAGTATAGAAATTAGTGGAGAAGTTTGTGGTGAAGAAGATTTTCCTGATGTCAAAGTAGAGCACCAGGAGACGTTCTTGGGGCATACTAGTCCAATCAGCCGATGTTGCTTCTCTGCTTCCGGGAACAATATCGCTAGTGCTTCTCTAGATGGAACTGTTAGAATATGGACATATGATTCATCAACTCCGGTGTCTAGAAATGCAACCATATATTGTGGCACAGAAATTTTGTCTCTTGACTGGGAATGTAAATCTGATCGCTTGCTGTTAATAGGTACATCAGATGGGTGTATTAAGGCATGGAATGTAGATGCAAAGAGAGTTGTTTGTGATCTCAATACAACTCAAGCATTTCCAAGTGTCTTGGACATAAAGTGCAGTCCCGTGGAACCTATTTTTGTATCTGCAGCAACATCTGGAGGTGCTGGTTCCAATTATTTTGACAACCTGGGTTTTGCTTCTCTCACTGTGTGGAACATGAAGACGTGGAAACCCATGACAGTCCTTCCTCTTGGAGAAGATCCACCAGCTATTACTTCTCTATGCTTTAATCACAATGGAAAAATTTTAGCTGCTTCTGCTGTTGATGGAATGATCCACATGTTTGACATGTCTGCTGGCCTACAAATTACTGGCTGGCCTGCACATGATTCTTCTATCAGTTCTATTCTTTTTGGACCGGATGAGACTAGCATTTTTAGCCTGGGCTCTGACAGGAAGATTTTTGAGTGGAGTTTGCAAAATCAAGGTCAAATTCTATGGTCAAGAGACTGCAGTAGGTTCTCTTACCCTCTGAAAGGTCCACAATATTGCAGACATGAGATGGCATTAGATGCAAGTGGGAGAAGACTCTTGGTAACGTCTAGTTCAGTTAGAGCCCCCATATACCAGGTTCAAGGTCATTTAAATGGTTGGAGAACACTTCCTCATGGTGCTCCTATTACTGCTGTGGATTGGCATCCTACCTCGCCCATTTTCCTGACTGGATCAGCTGATAACTCTGTCCGAGTGACATCTTTATCATAG 1944 0.446 MENMQYAEELVREFLVFRGFTNTLQSYDSELRTDLGKGFHVDKILDLIFSLYVPKFQADRLVALLSFFKHYLSSSSETALLSTLSKIQTSLLRFYVVHALQANRRDRVIDFFAVHGSDLLQRSQDWTRWFAIPYVKNPNQDPEFRVYFSKEWYEALHLSVRNFFSEIFNGTRLPALLKISSEMNATNVLKRDILNLNIKLAELQALLDEKEAKLSHYRSMEGSISSLSNLREESSQMSRGFPEVSPTAVPRAVQTEINQDSVVNGAANIQSEYVNSKSGDNSTGALNDRVGNDGSGDTMQTVHESPSIEISGEVCGEEDFPDVKVEHQETFLGHTSPISRCCFSASGNNIASASLDGTVRIWTYDSSTPVSRNATIYCGTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLNTTQAFPSVLDIKCSPVEPIFVSAATSGGAGSNYFDNLGFASLTVWNMKTWKPMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFDMSAGLQITGWPAHDSSISSILFGPDETSIFSLGSDRKIFEWSLQNQGQILWSRDCSRFSYPLKGPQYCRHEMALDASGRRLLVTSSSVRAPIYQVQGHLNGWRTLPHGAPITAVDWHPTSPIFLTGSADNSVRVTSLS* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g2018 647 ProSiteProfiles Trp-Asp (WD) repeats profile. 613 647 IPR001680 GO:0005515
Ahy9g2018 647 Gene3D - 211 446 IPR015943 GO:0005515
Ahy9g2018 647 Gene3D - 447 572 IPR015943 GO:0005515
Ahy9g2018 647 SMART WD40_4 512 551 IPR001680 GO:0005515
Ahy9g2018 647 SMART WD40_4 468 509 IPR001680 GO:0005515
Ahy9g2018 647 SMART WD40_4 607 645 IPR001680 GO:0005515
Ahy9g2018 647 SMART WD40_4 369 408 IPR001680 GO:0005515
Ahy9g2018 647 SMART WD40_4 324 363 IPR001680 GO:0005515
Ahy9g2018 647 Coils Coil 193 220 - -
Ahy9g2018 647 Pfam WD domain, G-beta repeat 606 643 IPR001680 GO:0005515
Ahy9g2018 647 Pfam WD domain, G-beta repeat 328 362 IPR001680 GO:0005515
Ahy9g2018 647 SUPERFAMILY WD40 repeat-like 319 643 IPR036322 GO:0005515
Ahy9g2018 647 PANTHER OS05G0299300 PROTEIN 1 646 - -
Ahy9g2018 647 Pfam Anaphase-promoting complex subunit 4 WD40 domain 481 531 IPR024977 -
Ahy9g2018 647 ProSiteProfiles Trp-Asp (WD) repeats profile. 331 372 IPR001680 GO:0005515
Ahy9g2018 647 MobiDBLite consensus disorder prediction 274 299 - -
Ahy9g2018 647 ProSiteProfiles Trp-Asp (WD) repeats profile. 519 554 IPR001680 GO:0005515
Ahy9g2018 647 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 613 647 - -
Ahy9g2018 647 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 331 366 - -
Ahy9g2018 647 Gene3D - 579 647 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g2018 Ahy-Chr9 108523978 108530893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g2018 K24760 - gmx:100788591 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3597 19 158560207 158564989 Ahy9g2018 9 108523978 108530893 hybridization