Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1195 ATGTCCGACACCCAACAAACCCTAATGCCCCTTCACTCCCCCGACCCCGACGATAACGACGAATCCCCTCCTAACCAACCCCAACCCGCATCCCCTGACCCAACCCGAACCGGAACCGGAACCGGAACCGCCATCGCCACCGCCCCTTCCCTCCTCCACCTCTCCTTCAACCAAGACTCTGGCTGCTTCGCCGCCGGCACCGACCGCGGCTTCCGCATCTACAACTGCGATCCTTTCCGCGAGATATTCCGCCGTGACTTCGGCCCAGGCGGCGGCACCTCTCTCGTTCACATGCTCTTCCGGTGCAACATCCTCGCCTTCGTCGGCGGCGGACCTGACCCTCGCCACCCTCCGAACAAGGTCATGATCTGGGACGACCACCAGTCGCGGTGCATTGGCGAGCTCTCATTCCGCTCCGAGGTCAAAGGCGTTTGCCTCCGAAGAGACCGAATCGTTGTAGTTCTCGCGCACAAGATTTTCGTGTACAATTTTGCCGACCTGAAGGTTCTTCACCAAATTGAGACAATTGCGAACCCTAAGGGTTTGTGCGAGGTTTCGCACTTGTCCGGGACGATGGTTCTTGCGTGCCCTGGGTTGCAGAAGGGGCAGGTTAGAGTTGAGCATTACGCCTCAAAGAGGACAAAATTCATCATGGCTCATGACTCGAGGATCACGTGCTTCTCGCTCACGCAGGATGGGAGGTTGCTCGCTACTGCAAGCAGTAAAGGAACCTTGGTGAGGGTTTTCAATACGTTAGATGGGTCCTTGTTGCAAGAGGTGCGGAGAGGTGCAGACCGTGCGGAAATATACAGCCTTGCCTTCTCTCCTACTGCACAGTGGCTAGCTGTTTCGAGTGATAAGGGGACCGTTCATGTCTTCAACTTAAAGGTTGATTCTGGACTTTTGGGGCTTGACAGATCGAATAGTTCATCCGAGTCAAATCCTAGTTCCCCAACAGCTGTTTCATCTCTTAAATTTATGAAAGGTGTTTTACCCAAGTACTTTAGCTCAGAGTGGTCTGTGGCTCAGTTTCGCCTGCAGGAAGGTTTGCAGCATATTGTTGCCTTTGGCCATCAAAAGAATACTATTGTTATACTAGGCATGGATGGCAGCTTTTATCGATGCCAGTTTGATTCTGCAAATGGAGGAGAGATGACACAACTTGAATATTACAATTTCCTCAAGACAGATGAGACATTCTAA 1203 0.5262 MSDTQQTLMPLHSPDPDDNDESPPNQPQPASPDPTRTGTGTGTAIATAPSLLHLSFNQDSGCFAAGTDRGFRIYNCDPFREIFRRDFGPGGGTSLVHMLFRCNILAFVGGGPDPRHPPNKVMIWDDHQSRCIGELSFRSEVKGVCLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPKGLCEVSHLSGTMVLACPGLQKGQVRVEHYASKRTKFIMAHDSRITCFSLTQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLLGLDRSNSSSESNPSSPTAVSSLKFMKGVLPKYFSSEWSVAQFRLQEGLQHIVAFGHQKNTIVILGMDGSFYRCQFDSANGGEMTQLEYYNFLKTDETF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1195 400 Pfam WD domain, G-beta repeat 263 294 IPR001680 GO:0005515
Ahy9g1195 400 Pfam WD domain, G-beta repeat 219 245 IPR001680 GO:0005515
Ahy9g1195 400 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 30 400 - -
Ahy9g1195 400 SMART WD40_4 210 250 IPR001680 GO:0005515
Ahy9g1195 400 SMART WD40_4 253 294 IPR001680 GO:0005515
Ahy9g1195 400 SMART WD40_4 128 163 IPR001680 GO:0005515
Ahy9g1195 400 SMART WD40_4 41 75 IPR001680 GO:0005515
Ahy9g1195 400 MobiDBLite consensus disorder prediction 1 43 - -
Ahy9g1195 400 Gene3D - 49 380 IPR015943 GO:0005515
Ahy9g1195 400 SUPERFAMILY WD40 repeat-like 50 296 IPR036322 GO:0005515
Ahy9g1195 400 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 30 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1195 Ahy-Chr9 31344626 31348247 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1195 K22991 - gmx:100787427 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1479 19 39480085 39483733 Ahy9g1195 9 31344626 31348247 hybridization
Ahy16g0229 16 2512640 2515376 Ahy9g1195 9 31344626 31348247 PCT
Ahy6g1091 6 15728207 15730894 Ahy9g1195 9 31344626 31348247 PCT