Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g1086 ATGTCTCTAGTGACCGAAGAGATCAAGGCCAAATCAGAGGTGTACCGAGGAGATGAATTGTGCCAAGAGAAAACACAGCTTCTCCTGAAGGAAGTAGGGTTACCCAATGGGTTACTTCCATTGAAGGACATGGAGGAGTGTGGGTACGAAAAGGAGAGTGGGTTCGTGTGGCTGAAGCAGAAAAAGAGCTCAACACACAAGTTCGAGAAGATTGGGAAGCTTGTGAGTTATGCCCCTGAGGTCACTGCGTTTGTTGAGGTTGGGAAGATCAAGAAGCTCACTGGTGTTAAGACCAAGGAGCTTCTTCTTTGGCTCACACTCACTGATATCTATGTCGATAACCCGCCCACCGGAAAGATCACTTTTCAGATCTCGTCAGGGCTATCCCGGTCATTTCCGACTTCCGCCTTCGAAGTCGAAGTGAAAGTTAAGGAGGAGAAGGAGGAGAAGGGGAGTGAAGTTAAAGAAGGAGCTGCCGCTGCTGCTGCTGCAACTGCTGTTCAAGTCAAAGAGGTTTGA 519 0.4875 MSLVTEEIKAKSEVYRGDELCQEKTQLLLKEVGLPNGLLPLKDMEECGYEKESGFVWLKQKKSSTHKFEKIGKLVSYAPEVTAFVEVGKIKKLTGVKTKELLLWLTLTDIYVDNPPTGKITFQISSGLSRSFPTSAFEVEVKVKEEKEEKGSEVKEGAAAAAAATAVQVKEV* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g1086 172 SUPERFAMILY At5g01610-like 3 140 IPR036758 -
Ahy9g1086 172 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
Ahy9g1086 172 Gene3D - 5 147 IPR036758 -
Ahy9g1086 172 PANTHER T31J12.3 PROTEIN-RELATED 2 162 IPR007493 -
Ahy9g1086 172 PANTHER PLANT/F25P12-18 PROTEIN 2 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g1086 Ahy-Chr9 23414325 23415218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g1086 - - gmx:100500427 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1365 19 29913773 29914844 Ahy9g1086 9 23414325 23415218 hybridization
Ahy16g0878 16 15721797 15722657 Ahy9g1086 9 23414325 23415218 PCT
Ahy6g0482 6 5910833 5911696 Ahy9g1086 9 23414325 23415218 PCT
Ahy9g1086 9 23414325 23415218 Ahy16g0878 16 15721797 15722657 PCT
Ahy9g1086 9 23414325 23415218 Ahy6g0482 6 5910833 5911696 PCT