Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0878 ATGTCTCTGGTAACAGAAGAAATCAAAGCTAGGTCAGAGGTATATCATGGAGACGAAATGTGTCAGGTGAAGTCGAAGGAGCTTCTAAAGGAGATCGAACTTCCCAACGGTCTGCTGCCATTGAAGGACATGGAGGAGTGCGGTTACGACAGAGGAACGGGGTTCGTGTGGCTGAAGCAGAAGAAACCCTACACGCACAAGTTCGAGAAGATTGGGAAGCTTGTGTCGTACGCGGCGGAGGTGACGGCGCAGGTGGAGAAAGGGAAGATCAAGAAGCTGACCGGAGTGAAGACGAAGGAGATTTTGCTGTGGGTTACGCTCAGTGACATCTATGTCGATGACCCTCCCACCGGCAAGATCACTTTCAAGACGCCCGCAGGGCTATTCAGGTCTTTTCCTGTCTCTGCCTTCGAGCTTGAGGAAGAGAAAGACAAGTCCGACGATGTCAAGGCTTCCGCCGCCGCCACCACCACGCAGGTCGACGAAGCCGTTCAGGTCAAGGAGGTCTGA 510 0.5333 MSLVTEEIKARSEVYHGDEMCQVKSKELLKEIELPNGLLPLKDMEECGYDRGTGFVWLKQKKPYTHKFEKIGKLVSYAAEVTAQVEKGKIKKLTGVKTKEILLWVTLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFELEEEKDKSDDVKASAAATTTQVDEAVQVKEV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0878 169 SUPERFAMILY At5g01610-like 3 145 IPR036758 -
Ahy16g0878 169 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Ahy16g0878 169 Gene3D - 5 149 IPR036758 -
Ahy16g0878 169 PANTHER T31J12.3 PROTEIN-RELATED 2 154 IPR007493 -
Ahy16g0878 169 PANTHER PLANT/F25P12-18 PROTEIN 2 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0878 Ahy-Chr16 15721797 15722657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0878 - - vra:106757663 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0878 16 15721797 15722657 Ahy16g0878 16 15721797 15722657 ECH
Ahy16g0878 16 15721797 15722657 Ahy6g0482 6 5910833 5911696 hybridization
Ahy16g0878 16 15721797 15722657 Ahy19g1365 19 29913773 29914844 PCT
Ahy16g0878 16 15721797 15722657 Ahy9g1086 9 23414325 23415218 PCT
Ahy19g1365 19 29913773 29914844 Ahy16g0878 16 15721797 15722657 PCT
Ahy9g1086 9 23414325 23415218 Ahy16g0878 16 15721797 15722657 PCT