Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0773 ATGTTTACCATTTTCTTCCTCTTCGCTCTTGTCTTCTCCGGTTCCCACGAGGCGGTTCAAGGCTACTGCGTCGCAGACCTTGGCGCCGCTCAAACCACCACAGGGTATCTCTGTAAACCGGCCAAGTCAGTAAAAATAGAAGACTTTTCAACCACCCTTCAGCCTCAAAACACCAACTTCTCCAAGGCTTTCAACATCTCGATATCCCCGGCATTCGTCGGACAAATACCGGGGCTTAACGGGCTGGGCTTCGCCGCGGCGAAGCTAGATCTGTTTGCGGGGGGTATAGTCCCGCTCCACTCGCATCCAGATGCCTCCGAGATGCTTCTAGTGACGGACGGTAAGATAACTGCCGGGTTCATATCACCAGATAACACGGTTTTTGTGAAGACAATAACAAAGGGTGACGTCATGGTTTTGCCACAAGGGTTGTTACATTTTCAGTTAAATTCTGGAGAGGGAAGTGCCACAGCTTTTCTTGCTTTCAGTAGCCCAAATCCAAGCGCACAGTTCGTTGATGTTGCGTTGTTTGCAAGCGCTCTGGATTCTGCATTTGTTACTAAGACTACGTATATTAGTCCTGCCGAAGTTAAGAGACTTAAGGGTGTTTTTGGTGGTCAAGGATAG 627 0.4896 MFTIFFLFALVFSGSHEAVQGYCVADLGAAQTTTGYLCKPAKSVKIEDFSTTLQPQNTNFSKAFNISISPAFVGQIPGLNGLGFAAAKLDLFAGGIVPLHSHPDASEMLLVTDGKITAGFISPDNTVFVKTITKGDVMVLPQGLLHFQLNSGEGSATAFLAFSSPNPSAQFVDVALFASALDSAFVTKTTYISPAEVKRLKGVFGGQG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0773 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 4 204 - -
Ahy9g0773 208 CDD cupin_OxOx 15 204 - -
Ahy9g0773 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 4 204 - -
Ahy9g0773 208 Pfam Cupin 54 198 IPR006045 -
Ahy9g0773 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Ahy9g0773 208 PRINTS Germin signature 100 120 IPR001929 GO:0030145
Ahy9g0773 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Ahy9g0773 208 SMART Cupin_1_3 50 198 IPR006045 -
Ahy9g0773 208 ProSitePatterns Germin family signature. 95 108 IPR019780 GO:0030145
Ahy9g0773 208 Gene3D Jelly Rolls 15 207 IPR014710 -
Ahy9g0773 208 SUPERFAMILY RmlC-like cupins 58 205 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0773 Ahy-Chr9 12296331 12297319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0773 1 206 Miscellaneous Gene Families AT5G20630 49.515 8.67e-64 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0773 - - adu:107464848 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1012 19 16147257 16148147 Ahy9g0773 9 12296331 12297319 hybridization