Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0583 ATGGCGACGGCCAACCCTTTCGATTTGTTAGGTGACGACGCCGAGGACCCCTCGCAGCAACTCGCCGCCGCGGAAGCTATGGCTGCTGCGGTGGCTCCACCCAAGAAGGGTTCAGCTGCGGCGGCGGCTCAGCAGCAGAAGCCGCCAGCTCAGTTGCCTTCTAAGCCTGTTCCTCCTTCTCAGGCTGTGAGGGATGCAAAAAATGAATCATCACGTGGTGGTCGTGGTGGTGGAGGTGGAAGAGGAGGAGGTGGAAGAGGATATGGACGTGGTCGTGGTGGCCCTGGATTTAACCGTGACTCTCCAAGTGATGATAACTCATTCCCTGCTGCTGGAGGCCCTGCAAACCAAGTTGCCTTTGAAGGAGATGATGGGAGGCCTTCAGAAAGACGTGGCTATGGTGTTGGGAGGCCTTATCGTGTTGGTGGTCGTCGTGGAGGTTTCAGCAATGGCGAAGCTGGCGAAGAAGGGCGTCCACGAAGACTTGAACGCCGCAGTGGGACAGGCCGCGGCAATGAACTTAAACGTGAAGGCTCTGGGCGTGGTAACTGGGGAACCCCTGCTGATGAAATTGCTCCGGTGACTGAGGAGGGAGTGAATGAAACTGAAAAGATTGTGGGCGAGGAGATCCCTGCTGGCGAGGGAACTGCAGAAGATGCAAACAAGGACAGTGCTGCCAATGAAGCTGTAGAAAAGGAGCCGGAGGAGAAGGAGATGACATTGGAGGAATATGAGAAGGTGCTGGAAGAGAAACGGAAGGCATTCCAAGCGCTCAAAACTGAGGAGAGAAAGGTGGATATTAAGGAATTTGAATCCATGCAGCCACTGTCAAGCAAGAAAGACAACCATGACATCTTCATTAAGTTGGGATCGGACAAGGATAAGCGCAAAGATGCTTTGGAGAAGGAGGAGAAATCCAAGAAGTCTGTCAGCATCAACGAGTTTCTGAAGCCTGCTGAAGGAGAAAGGTACTACAACCCAGGCGGACGTGGCAGACGTGGCCAAGGTTCTAGAGGTTATGGTGGAAATGCTGGCAGCAACGCCCAGGCCCCGTCGATTGCAGATCCTGGGCACTTCCCAACCTTGGGTGGCAAGTGA 1098 0.5428 MATANPFDLLGDDAEDPSQQLAAAEAMAAAVAPPKKGSAAAAAQQQKPPAQLPSKPVPPSQAVRDAKNESSRGGRGGGGGRGGGGRGYGRGRGGPGFNRDSPSDDNSFPAAGGPANQVAFEGDDGRPSERRGYGVGRPYRVGGRRGGFSNGEAGEEGRPRRLERRSGTGRGNELKREGSGRGNWGTPADEIAPVTEEGVNETEKIVGEEIPAGEGTAEDANKDSAANEAVEKEPEEKEMTLEEYEKVLEEKRKAFQALKTEERKVDIKEFESMQPLSSKKDNHDIFIKLGSDKDKRKDALEKEEKSKKSVSINEFLKPAEGERYYNPGGRGRRGQGSRGYGGNAGSNAQAPSIADPGHFPTLGGK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0583 365 Coils Coil 241 264 - -
Ahy9g0583 365 MobiDBLite consensus disorder prediction 289 311 - -
Ahy9g0583 365 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 365 IPR039764 GO:0003723
Ahy9g0583 365 MobiDBLite consensus disorder prediction 289 365 - -
Ahy9g0583 365 SMART HABP4_PAI_RBP1_2 158 266 IPR006861 -
Ahy9g0583 365 Gene3D - 156 269 - -
Ahy9g0583 365 MobiDBLite consensus disorder prediction 1 240 - -
Ahy9g0583 365 Pfam Hyaluronan / mRNA binding family 160 265 IPR006861 -
Ahy9g0583 365 Pfam Stm1 1 77 IPR019084 -
Ahy9g0583 365 MobiDBLite consensus disorder prediction 224 240 - -
Ahy9g0583 365 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 365 - -
Ahy9g0583 365 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0583 Ahy-Chr9 8166264 8170156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0583 K13199 - gmx:100807657 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0711 19 9834003 9837964 Ahy9g0583 9 8166264 8170156 hybridization
Ahy9g0583 9 8166264 8170156 Ahy14g2742 14 135406991 135411154 PCT
Ahy9g0583 9 8166264 8170156 Ahy4g2404 4 121147788 121151684 PCT