Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g2404 ATGACTACCATGAACCCCTTTGATTTGTTGAAAGATGATACTGAGGATCCTTCTCAGCTCATCGCCAACGAGCAGCTCAAGGCTGCTGCTGCTGCCGCCACCGCCGTTCCGCCCAAGAAAGGGGCGGCGGCGGCTCCGCAGAAAGGAGGGCAGCAAAATAAGCCTGCTCAGCTCCCTACCAAGCCTACTCCTCCTGGTCAAGCTGTGAGGGAGGCAAAAAATGAGGCTTCTCGTGGAGGCCGTGGAGGTGGACGAGGTGCTGGGCGTGGAGGTGGACGGGGTCGTGGTTTTAACCGTGACTTTTCAAATGATGAGGGCTCATTCCCAGCCTCTGGAGCCCCTGCTACTCAAAGTGGTTTTGAGGAAGGAGATGGTGGGAGGACCTCAGATAGACGAGGCGGTTATGGTGGGCGAGGCCCTTACCGTGGTGGTCGCCGGGGAGACTTCAGCAATGGGGAAGCTGGAGAAGAAGGAAGGCCAAGAAGACTATATGAACGCCGCAGTGGGACTGGACGCGGAAATGAGTTTAAGCGTGAAGGTGCTGGACGAGGAAACTGGGGAACACAGTCTGATGAAATTGCTCAGGTGACTGATGAAGTCGTGAATGAAGCTGAAAAGAATTTGGGCGAGGAGAAGCCTGCTGGTGAAGATGTGGCTGATGTAAACAAGGAGAGTCTTGCTGAAGAAGCTGAACAAAAAGAGCCTGAGGATAAGGAGATGACTCTGGAGGAGTATCAGAAAGTGCTGGAAGAGAAAAGAAAGGCCCTTCAAGCACTAAAGACTGAGGAGAGAAAGGTTGATATCAAAGAATTTGCATCCATGCAGCCCCTATCAAACAAGAAAGTCAACAATGACATCTTCATTAAATTGGGATCTGATAAGGATAGGCGCAAAGAAGCATTGGAGAGGGAGGAGAGATCCAAGAAGTCTGTCAGCATTAACGAGTTTCTGAAGCCAGCTGATGGGGAAGTCTACTATGGTGGGCGTGGCCGGGGACGCCCCCGTGGTCCAAAGGGGGGTAGCTACCGTGGCAACTCCAACAATGCACAAGCTCCCTCCATTGAAGACCCTGGTCATTTCCCAACTTTGGGTGGCAACTGA 1101 0.5259 MTTMNPFDLLKDDTEDPSQLIANEQLKAAAAAATAVPPKKGAAAAPQKGGQQNKPAQLPTKPTPPGQAVREAKNEASRGGRGGGRGAGRGGGRGRGFNRDFSNDEGSFPASGAPATQSGFEEGDGGRTSDRRGGYGGRGPYRGGRRGDFSNGEAGEEGRPRRLYERRSGTGRGNEFKREGAGRGNWGTQSDEIAQVTDEVVNEAEKNLGEEKPAGEDVADVNKESLAEEAEQKEPEDKEMTLEEYQKVLEEKRKALQALKTEERKVDIKEFASMQPLSNKKVNNDIFIKLGSDKDRRKEALEREERSKKSVSINEFLKPADGEVYYGGRGRGRPRGPKGGSYRGNSNNAQAPSIEDPGHFPTLGGN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g2404 366 MobiDBLite consensus disorder prediction 291 366 - -
Ahy4g2404 366 SMART HABP4_PAI_RBP1_2 160 267 IPR006861 -
Ahy4g2404 366 MobiDBLite consensus disorder prediction 203 240 - -
Ahy4g2404 366 MobiDBLite consensus disorder prediction 149 179 - -
Ahy4g2404 366 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 365 IPR039764 GO:0003723
Ahy4g2404 366 MobiDBLite consensus disorder prediction 291 312 - -
Ahy4g2404 366 Pfam Stm1 1 83 IPR019084 -
Ahy4g2404 366 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 365 - -
Ahy4g2404 366 Coils Coil 242 265 - -
Ahy4g2404 366 Gene3D - 158 270 - -
Ahy4g2404 366 MobiDBLite consensus disorder prediction 28 240 - -
Ahy4g2404 366 Pfam Hyaluronan / mRNA binding family 160 266 IPR006861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g2404 Ahy-Chr4 121147788 121151684 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g2404 K13199 - gmx:100814825 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g2742 14 135406991 135411154 Ahy4g2404 4 121147788 121151684 hybridization
Ahy19g0711 19 9834003 9837964 Ahy4g2404 4 121147788 121151684 PCT
Ahy9g0583 9 8166264 8170156 Ahy4g2404 4 121147788 121151684 PCT