Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0564 ATGGTTACATGCAATTCACACTTCTATGGTTCTGCTCCTTCACTTCTTCCTATCTCGGTTCGAAAGTTCCAAAGTTCTTGTGAATATCACTCCATAGCCTCTTTGAAATTCACTCAAGTCTCAGCAAAAGAGAAGAAGACAAAACCAAAGGTGCCTCCAATCCAAAATGAACTTCACATCAACCTTGTAGAAACACAACAGCTTCATTGCCAGTTGCTCAAGAACTGTTCCGATTGCGCTTATAGACTCACTTTTCCTGCGCTTAAGTCCTACTCGAGCAATGCAGCTCTTTACAGCTTCTTGATAACATCTTACATTAAGAACAATTGCCCTGAAGATGCAGTGAAAATATATATCCATATGCGAAAAACCGATGCCAAAATTGACAATTTCATCATACCATCAGCTCTCAAAGCATGCTGTGTTGTCCCTTCAGCTCTGCTAGGACAAGAGGTGCATGGTTTTGTGGTCAAGAATGGATTTCATAGTGATGTTTTTGTCTGCAATGCATTGATGATGATGTACAGTGAGGTTGGAAACTTGGCATCTGCATGCCAATTATTCGACAAGATTGAGAAAAGAGATGCTGTCTCTTGGAGTATTATGCTTCGAAACTATAGTCGCCACGGTATGCTCAATGAAGCATTGAACCTTGTGAGAGAAATGCATGCTATTGGAGTGAAGCCTAGTGAAATTGCAATGATAAGCATCATTCATGTAATTGCAGAACTTGCTGATATGAAATTGGGTAAAGGCATTCATGCTTATGTCACAAGGAACATGAGCTATGAGAAACCAAGTGTTCCTCTAAGTACTGCTTTGATAGATTTGTATGCTAAATGTGCAAATTTAGCTTATGCAAGAAGAATTTTCGACAATTTGTCCGCGGCAAGTATAATCTCCTGGACTGCTATGATTGCAGCCTATATCCATTGCAATGATTTGAATGAGGGTTTTAGGCTGTTTATCAAAATTCTAGTTGAGGGTGTGTTTCCAAATGATATCACAATCCTTAGTTTGGTCAAAGGATGCGGCGCAGCCAGAGCACTAAAACTAGGCAAGTTGTTACATGCTTTTACATTAAGAAATGGGATTGCCATGTCTTTAAATCTAGCCACCGCTTTTCTTGATATGTATGGCAAATGCAGCGATGTAAGAAGCGCGAGATCTGTTTTCAATAATAGCACCAAGAACAAAGATTTAATGATGTATAGCGCCATGATTTCGGCTTATGCGAAAGCTGATTGTATAGATGAGGCATTTGATATATTTGCTCAGATGACTGGATGTGGAATTAAACCAAATGAGATAACCATGGTTAGCCTCCTTTCGCTATGTGCAAAATCTGGATCACTTGAAATGGGTAAGTGGATACATTCTTACTTAGACAAACAAGGAATCAAAGCAGATATGGTTCTGAAAACATCTTTGGTGGACATGTATTCGAAGTGTGGAGACATAGATACAGCTTATGGACTATTCATCAAGGCCAACGACCGAGATATTTCTATGTGGAATGCCATGATATCTGGTTTTGCAATGCATGGTCATGGTAATTCAGCATTGGAACTCTTTGCTGAAATGGAAGCACAAGGAGTTATCCCTAATGACATAACATTCATTGCAGTTCTTCATGCTTGTAGCCATGCCGGATTGGTTCAAGAAGGGAAGAGGCTGTTTTGCAGAATGGTTAATGAATTCAGTTTGGTCCCAAAGATTGAACACTATGGCTGTATGGTAGACCTTCTCAGTCGAGCAGGATCACTCGAAGAAGCTCAAGAACTAATTAAGGACATGCCTATGAGGCCAAACTCGGCTGTATTAGGATCTTTTCTTGCTGCTTGCAAAGTTCACAAAAATGTGAACCTTGCTGAATGGGCTGCAAAACAGTTTCTATCATTAGAACCCGAAAAATGTGGATACAATGTCCTAATGTCAAACATCTGGGCTGCATCAAACAGATGGGAAAATGTTGCTGATATAAGGAGAGCTATGAAGGATGCAGGGATTCATAAAGAACCGGGTTTCAGCTCCATTGAAGTGCATGGAACGATTCATGAATTTGTAATGGGAGATAGAGAACACCCAGAAACACCAAAGATTTATGAAATGATTGGTGAGATGAGAGAAAAGCTAGAACATGCTGGATACACTCCAAATGTATCTGTTGTGCTGAAGAACATAGATATGGAGGAAAAAGAGAGTGCAGTAAATTATCACAGTGAAAAACTTGCAATGGCTTATGGTTTGATTAGCACAGGTCATGGAATTCAGCTTCGGATTTTGAAGAATCTTAGAATATGTGAAGACTGTCATAATGCAACAAAGTTGGTGTCCAAGATTTATGGGAGGGAGATAATTGTGAGGGATCGTAATCGCTTTCACCATTTCAAAGAAGGATTTTGTTCTTGTAATGAGTATTGGTAG 2427 0.3964 MVTCNSHFYGSAPSLLPISVRKFQSSCEYHSIASLKFTQVSAKEKKTKPKVPPIQNELHINLVETQQLHCQLLKNCSDCAYRLTFPALKSYSSNAALYSFLITSYIKNNCPEDAVKIYIHMRKTDAKIDNFIIPSALKACCVVPSALLGQEVHGFVVKNGFHSDVFVCNALMMMYSEVGNLASACQLFDKIEKRDAVSWSIMLRNYSRHGMLNEALNLVREMHAIGVKPSEIAMISIIHVIAELADMKLGKGIHAYVTRNMSYEKPSVPLSTALIDLYAKCANLAYARRIFDNLSAASIISWTAMIAAYIHCNDLNEGFRLFIKILVEGVFPNDITILSLVKGCGAARALKLGKLLHAFTLRNGIAMSLNLATAFLDMYGKCSDVRSARSVFNNSTKNKDLMMYSAMISAYAKADCIDEAFDIFAQMTGCGIKPNEITMVSLLSLCAKSGSLEMGKWIHSYLDKQGIKADMVLKTSLVDMYSKCGDIDTAYGLFIKANDRDISMWNAMISGFAMHGHGNSALELFAEMEAQGVIPNDITFIAVLHACSHAGLVQEGKRLFCRMVNEFSLVPKIEHYGCMVDLLSRAGSLEEAQELIKDMPMRPNSAVLGSFLAACKVHKNVNLAEWAAKQFLSLEPEKCGYNVLMSNIWAASNRWENVADIRRAMKDAGIHKEPGFSSIEVHGTIHEFVMGDREHPETPKIYEMIGEMREKLEHAGYTPNVSVVLKNIDMEEKESAVNYHSEKLAMAYGLISTGHGIQLRILKNLRICEDCHNATKLVSKIYGREIIVRDRNRFHHFKEGFCSCNEYW* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0564 808 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 400 434 IPR002885 -
Ahy9g0564 808 Pfam DYW family of nucleic acid deaminases 716 808 IPR032867 GO:0008270
Ahy9g0564 808 Pfam PPR repeat family 501 548 IPR002885 -
Ahy9g0564 808 Pfam PPR repeat family 400 447 IPR002885 -
Ahy9g0564 808 TIGRFAM PPR: pentatricopeptide repeat domain 197 230 IPR002885 -
Ahy9g0564 808 TIGRFAM PPR: pentatricopeptide repeat domain 504 536 IPR002885 -
Ahy9g0564 808 TIGRFAM PPR: pentatricopeptide repeat domain 403 436 IPR002885 -
Ahy9g0564 808 Gene3D Tetratricopeptide repeat domain 554 747 IPR011990 GO:0005515
Ahy9g0564 808 Gene3D Tetratricopeptide repeat domain 146 252 IPR011990 GO:0005515
Ahy9g0564 808 Gene3D Tetratricopeptide repeat domain 254 348 IPR011990 GO:0005515
Ahy9g0564 808 Gene3D Tetratricopeptide repeat domain 458 553 IPR011990 GO:0005515
Ahy9g0564 808 Gene3D Tetratricopeptide repeat domain 349 457 IPR011990 GO:0005515
Ahy9g0564 808 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 298 332 IPR002885 -
Ahy9g0564 808 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 195 229 IPR002885 -
Ahy9g0564 808 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 501 535 IPR002885 -
Ahy9g0564 808 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 206 727 - -
Ahy9g0564 808 Pfam E motif 618 680 IPR046848 -
Ahy9g0564 808 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 96 458 - -
Ahy9g0564 808 PANTHER BNAC02G09320D PROTEIN 206 727 - -
Ahy9g0564 808 PANTHER BNAC02G09320D PROTEIN 96 458 - -
Ahy9g0564 808 Pfam PPR repeat 167 194 IPR002885 -
Ahy9g0564 808 Pfam PPR repeat 197 227 IPR002885 -
Ahy9g0564 808 Pfam PPR repeat 475 496 IPR002885 -
Ahy9g0564 808 Pfam PPR repeat 98 123 IPR002885 -
Ahy9g0564 808 Pfam PPR repeat 575 600 IPR002885 -
Ahy9g0564 808 Pfam PPR repeat 300 330 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0564 Ahy-Chr9 7886745 7890477 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy9g0564 98 808 Glycoside Hydrolase AT3G49170 35.596 3.06e-156 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0564 - - adu:107464415 1613.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0688 19 9478735 9482494 Ahy9g0564 9 7886745 7890477 hybridization