Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g0688 ATGGTTACATGCAATTCACACTTCTATGGTTCTGCTCCTTCACTTCTTCCTATCTCGGTTCGAAAGTTCCAAAGCTCTTGTGAATATCACTCCATAGCCTCTTTGAAATTCACTCAAGTCTTAGCAAAAGAGAAGACAAAACCAAAGGTGCCTCCAATCCAAAATGAACTTCACATCAACCTTGTAGAAACACAACAGCTTCATTGCCAGTTGCTCAAGAACTGTTCCGATTGCGCTTATAGACTCACTTTTCCTGCACTTAAGTCCTACTCTAGCAATGCAGCACTTTACAGCTTCTTGATAACATCTTACATTAAGAACAATTGCCCTGAAGATGCAGTGAAAATATATAACCATATGCGAAAAACCGATGCCAAAATTGACAATTTCATCATACCATCAGTTCTCAAAGCATGCTGTGTTGTCCCTTCAGCTCTGCTAGGACAAGAGGTGCATGGTTTTGTGGTCAAGAATGGATTTCATAGTGATGTTTTTGTCTGCAATGCATTGATGATGATGTACAGTGAGGCTGGAAACTTCGCATCTGCATGCCAATTATTCGATGACATTGAGAAAAGAGATGCTGTTTCTTGGAGTATTATGCTTCGAAACTATAGTCGCCACGGTATGCTCAATGAAGCATTGAACCTTGTGAGAGAAATGCATGCTATTGGAGTGAAGCCTAGTGAAATTGCAATGATAAGCATCATTCATGTAATTGCAGAACTTGCTGATATGAAATTGGGTAAAGCCATTCATGCTTATGTCACAAGGAACATGAGCTATGAGAAACCAAGTGTTCCTCTAAGTACTGCTTTGATAGATTTGTATGCTAAATGTGCAAATTTAGCTTATGCAAGAAGAATTTTTGACAATTTGTCCGCGGCAAGTATAATTTCCTGGACTGCTATGATTGCAGCCTATATCCATTGCAATGATTTGAATGAGGGTTTTAGGCTGTTTATCAAAATTCTAGATGAGGGTATGTTTCCAAATGATATCACAATCCTTAGTTTGGTCAAAGGATGCGGCGCAGCTGGAGCACTAAAACTAGGCAAGTTGTTACATGCTTTTACATTAAGAAATGGGATTGCCATGTCTTTAAATCTAGCCACTGCTTTTCTTGATATGTATGGCAAATGCAGCGATGTAAGAAGTGCACGATCTGTTTTCAATAATAGCACCAAGAACAAAGATTTAATGATGTATAGCGCCATGATTTCGGCATATGCAAAAGCTGATTGTATAGATGAGGCATTTGATATATTTGCTCAGATGACTGGATGTGGAATTAAACCAAATGAGATAACCATGGTTAGCCTCCTTTCGCTATGCGCAAAATCTGGATCACTTGAAATGGGTAAGTGGATACATTCTTACTTAGACAAACAAGGAATCAAAGCAGATATGGTTCTGAAAACATCTTTGGTGGACATGTATTCTAAGTGTGGAGACATAGATACAGCTTGTGGACTATTCGTCGAGGCCAACGACCGAGATATTTCTATGTGGAATGCCATGATATCTGGTTTTGCAATGCATGGTCATGGTAATTCAGCATTGGAACTCTTTGCTGAAATGGAAGCACAAGGAGTTATCCCTAATGACATAACATTCATTGCAGTTATTCATGCTTGTAGCCATGCCGGATTGGTTCAAGAAGGGAAGAGGCTGTTTTGCAGAATGGTTAATGAATTCAGTTTGGTCCCAAAGATTGAACACTATGGCTGTATGGTAGACCTTCTCGGTCGAGCAGGATCACTCGAAGAAGCTCAAGAACTAATTAAGGACATGCCTATGAGGCCAAACTCGGCCGTATTGGGATCTTTTCTTGCTGCTTGCAAAGTTCACAAAAATGTGAACCTTGGTGAATGGGCTGCAAAACAGTTTCTATCATTAGAACCCGAAAAATGTGGATACAATGTCCTAATGTCAAACATCTATGCTGCATCAAACAGATGGGAAAATGTTGCTGATATAAGAAGAGCTATGAAGGATGCAGGGATTCATAAAGAGCCAGGTTTCAGCTCCATTGAAGTGCATGGAACGATTCATGAATTTGTAATGGGAGATAGAGAACACCCAGAAACACCAAAGATTTATGAAATGATTGCTGAGATGAGAGAAAAGCTAGAACATGCTGGATACACTCCAAATGTATCTGTTGTGCTGAAGAACATAGATATGAAGGAAAAAGAGAGTGCAGTAAATTATCACAGTGAAAAACTTGCAATGGCTTATGGTTTGATTAGCACAGGTCCTGGAATTCAGCTTCGGATTTTGAAGAATCTTAGAATTTGTGAAGACTGTCATAATGCAACAAAGTTGGTGTCTAAGATTTATGGGAGGGAGATAATTGTGAGGGATCGTAATCGCTTTCACCATTTCAAAGAAGGATTTTGTTCTTGTAATGAGTATTGGTAG 2424 0.3932 MVTCNSHFYGSAPSLLPISVRKFQSSCEYHSIASLKFTQVLAKEKTKPKVPPIQNELHINLVETQQLHCQLLKNCSDCAYRLTFPALKSYSSNAALYSFLITSYIKNNCPEDAVKIYNHMRKTDAKIDNFIIPSVLKACCVVPSALLGQEVHGFVVKNGFHSDVFVCNALMMMYSEAGNFASACQLFDDIEKRDAVSWSIMLRNYSRHGMLNEALNLVREMHAIGVKPSEIAMISIIHVIAELADMKLGKAIHAYVTRNMSYEKPSVPLSTALIDLYAKCANLAYARRIFDNLSAASIISWTAMIAAYIHCNDLNEGFRLFIKILDEGMFPNDITILSLVKGCGAAGALKLGKLLHAFTLRNGIAMSLNLATAFLDMYGKCSDVRSARSVFNNSTKNKDLMMYSAMISAYAKADCIDEAFDIFAQMTGCGIKPNEITMVSLLSLCAKSGSLEMGKWIHSYLDKQGIKADMVLKTSLVDMYSKCGDIDTACGLFVEANDRDISMWNAMISGFAMHGHGNSALELFAEMEAQGVIPNDITFIAVIHACSHAGLVQEGKRLFCRMVNEFSLVPKIEHYGCMVDLLGRAGSLEEAQELIKDMPMRPNSAVLGSFLAACKVHKNVNLGEWAAKQFLSLEPEKCGYNVLMSNIYAASNRWENVADIRRAMKDAGIHKEPGFSSIEVHGTIHEFVMGDREHPETPKIYEMIAEMREKLEHAGYTPNVSVVLKNIDMKEKESAVNYHSEKLAMAYGLISTGPGIQLRILKNLRICEDCHNATKLVSKIYGREIIVRDRNRFHHFKEGFCSCNEYW* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g0688 807 Gene3D Tetratricopeptide repeat domain 458 746 IPR011990 GO:0005515
Ahy19g0688 807 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
Ahy19g0688 807 Gene3D Tetratricopeptide repeat domain 146 223 IPR011990 GO:0005515
Ahy19g0688 807 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 194 228 IPR002885 -
Ahy19g0688 807 PANTHER - 75 209 - -
Ahy19g0688 807 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 399 433 IPR002885 -
Ahy19g0688 807 Pfam E motif 617 679 IPR046848 -
Ahy19g0688 807 Pfam PPR repeat family 399 446 IPR002885 -
Ahy19g0688 807 Pfam PPR repeat family 297 343 IPR002885 -
Ahy19g0688 807 Pfam PPR repeat family 500 547 IPR002885 -
Ahy19g0688 807 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 163 193 IPR002885 -
Ahy19g0688 807 Pfam PPR repeat 97 122 IPR002885 -
Ahy19g0688 807 Pfam PPR repeat 196 226 IPR002885 -
Ahy19g0688 807 Pfam PPR repeat 474 495 IPR002885 -
Ahy19g0688 807 Pfam PPR repeat 574 599 IPR002885 -
Ahy19g0688 807 Pfam PPR repeat 166 193 IPR002885 -
Ahy19g0688 807 PANTHER - 166 343 - -
Ahy19g0688 807 Pfam DYW family of nucleic acid deaminases 715 807 IPR032867 GO:0008270
Ahy19g0688 807 PANTHER - 298 411 - -
Ahy19g0688 807 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 297 331 IPR002885 -
Ahy19g0688 807 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 93 127 IPR002885 -
Ahy19g0688 807 Gene3D Tetratricopeptide repeat domain 350 457 IPR011990 GO:0005515
Ahy19g0688 807 Gene3D Tetratricopeptide repeat domain 84 145 IPR011990 GO:0005515
Ahy19g0688 807 Gene3D Tetratricopeptide repeat domain 242 349 IPR011990 GO:0005515
Ahy19g0688 807 PANTHER - 75 209 - -
Ahy19g0688 807 PANTHER - 395 724 - -
Ahy19g0688 807 TIGRFAM PPR: pentatricopeptide repeat domain 97 126 IPR002885 -
Ahy19g0688 807 TIGRFAM PPR: pentatricopeptide repeat domain 537 565 IPR002885 -
Ahy19g0688 807 TIGRFAM PPR: pentatricopeptide repeat domain 196 229 IPR002885 -
Ahy19g0688 807 TIGRFAM PPR: pentatricopeptide repeat domain 503 535 IPR002885 -
Ahy19g0688 807 TIGRFAM PPR: pentatricopeptide repeat domain 299 332 IPR002885 -
Ahy19g0688 807 TIGRFAM PPR: pentatricopeptide repeat domain 402 435 IPR002885 -
Ahy19g0688 807 PANTHER - 298 411 - -
Ahy19g0688 807 PANTHER - 395 724 - -
Ahy19g0688 807 PANTHER - 166 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g0688 Ahy-Chr19 9478735 9482494 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy19g0688 97 807 Glycoside Hydrolase AT3G49170 35.596 2.55e-157 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g0688 - - adu:107464415 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0688 19 9478735 9482494 Ahy9g0564 9 7886745 7890477 hybridization