Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy9g0461 ATGGCTAATAATCATTGCTGTTCAACTCAACTTATTGATGGAGATGGTACATTCAATGTAACTGGGATTGAAAGTTTCATGAAGGAGGTGAAATTTAGTGAATGTGGGCTTTCGTACGCTGTAGTTTCCATTATGGGTCCACAAAGTAGTGGCAAAAGCACGCTGTTAAACAATTTGTTTCGTACCAATTTCCGTGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTACTGGGATAGAGCCTTGTACCATTGTGATGGATTTGGAAGGAACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCTTTATTTGCTCTTGCTGTCTCAGATATAGTGCTAATCAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCTAATAAGCCACTCTTGAAAACTGTCTTTCAGGTTATGATGAGATTGTTTAGCCCACGCAAAACGACATTGTTGTTTGTCATACGTGACAAAACGCGGACACCACTTGAAAATTTAGAACCTGTCTTGCGAGAAGATATTCAGAAGATATGGGACTCGGTTCCTAAACCACAAGCCCACAAGGAAACCCCACTTAGTGAATTTTTTAATGTTGAAGTTACTGCTCTTTCTAGTTATGAAGAAAAAGAAGAGCAATTTAAGGAGCAGGTTGCCAACTTGAGGCAACGATTCCAGCACTCCATCGCTCCTGGTGGGCTTGCAGGGGACAGGCGAGGAGTAGTTCCTGCATCGGGCTTTTCTTTTAGTGCTCAGCAAATCTGGAAAGTCATCAAAGAGAACAAGGACCTTGACCTTCCTGCACATAAGGTAATGGTTGCCACTGTCCGATGTGAAGAAATTGCCAACGAGAAATATGCAACTTTTTCTGCAAATGAGGAATGGTGCCAATTAGAAGAAGCCGTACAATCAGGCCCTGTTCAGGGGTTTGGAAAAAAACTCAATTCACTCCTAGGTGCTTGTTTGTCAGAGTATGATCTTGAAGCCACTTATTTTGATGAAGGTGTGAGATCTGCAAAACAAAAACAACTCCAAGAAAAATTGTTGCAACTTGTCCAACCATCGTTCCTTTCTGCGCTGGGACATATAAGATCTGGAATAGTGGATAAATTCAAGGATGTATTTGACAAGGCTTTGAATAGAGGTGAAGGGTTTTCTTTGGCTGCCAAAAACTGCATTGAGTCTTCTATGGCTCAATTTGACGAAGCTTGTGCAGATGTTGTAATTGAACTAGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTGCGGCGTGACATTGATGCACATGTGGCATCTGTACGTGATGCTAAGCTTTCTGAACTGACTTCATCGTATGAGGAAAAACTTAAAGAAGCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGAAGCAAGTGGTGATACTTGGTCATCAATAAAGAAACTTCTTAGGCGTGAGACTGAATCAGCTGTCTCAGGGTTCTCTGCTGCACTTGCTGGGTTTGATATGGATGAAGATACGAGACAGAAAATGATTTCGAATATAGCAGATTATGCTAGGGGTGTAGTAGAAGGAAAGGCTAGGGATGAAGCTGGAAGAGTTCTAATCCGGATGAAGGATAGATTTACGATGTTGTTTAGCCACGACACTGATTCAATGCCTCGTGTATGGACGGGCAAAGAAGATATCCGTACCATCACAAAGACTGCTCGCTCTGCTTCTTTGAAGTTACTGTCTGTCATGGCTGTTATTCGTTTGGATGATGGTGATACTGATAATATTGAGAAAACATTAGCCGTTGCATTGATAGATTCATCAAGCAGTAATGTTACTGATAGGAGCATCACAACGGTTGATCCGCTAGCTTCTAGCACATGGGAAAAGGTACCATCCTCTAAGACATTGATTACACCTGTCCAATGCAAATCCTTGTGGAGGCAATTCAAGACAGAGACAGAATACAGTGTCTCTCAGGCCATTTCTGCACAGGAGGCCAACAAGCGTAATAACAACTGGTTACCTCCTCCATGGGCAATACTTGCTTTGATTATTCTCGGATTTAATGAATTTATGACACTCTTAAGAAATCCGTTGTATTTGCTTGTCATCTTTATTGGTTATCTTCTCATCAAAGCCCTATGGGTGCAATTGGACATTACGGGTGAATTTCGCCATGGAGCTCTGCCGGGACTCTTATCCTTGTCTACCAAATTCGTTCCAACTGTCATGAACCTTATGAAAAAACTAGCAGACGAGGGTGCAGATAACAATACTCGCAGAAATCCACCAAAAGGCGATTACAAGGCTGCTAATGATGGTAGTGCTGCATCTTCCAGTGCTTCATCAAATGTAAGTGTGCTTGACAACGGAACCAAACACAACAGAACTGAATACGCCAGTTCATCAAAATTCGAGTAG 2439 0.4227 MANNHCCSTQLIDGDGTFNVTGIESFMKEVKFSECGLSYAVVSIMGPQSSGKSTLLNNLFRTNFREMDAFKGRSQTTKGIWMARCTGIEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVTALSSYEEKEEQFKEQVANLRQRFQHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYATFSANEEWCQLEEAVQSGPVQGFGKKLNSLLGACLSEYDLEATYFDEGVRSAKQKQLQEKLLQLVQPSFLSALGHIRSGIVDKFKDVFDKALNRGEGFSLAAKNCIESSMAQFDEACADVVIELADWDTSKVREKLRRDIDAHVASVRDAKLSELTSSYEEKLKEALSGPVEALLDEASGDTWSSIKKLLRRETESAVSGFSAALAGFDMDEDTRQKMISNIADYARGVVEGKARDEAGRVLIRMKDRFTMLFSHDTDSMPRVWTGKEDIRTITKTARSASLKLLSVMAVIRLDDGDTDNIEKTLAVALIDSSSSNVTDRSITTVDPLASSTWEKVPSSKTLITPVQCKSLWRQFKTETEYSVSQAISAQEANKRNNNWLPPPWAILALIILGFNEFMTLLRNPLYLLVIFIGYLLIKALWVQLDITGEFRHGALPGLLSLSTKFVPTVMNLMKKLADEGADNNTRRNPPKGDYKAANDGSAASSSASSNVSVLDNGTKHNRTEYASSSKFE* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy9g0461 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 276 IPR027417 -
Ahy9g0461 812 PANTHER PROTEIN SEY1 6 787 IPR008803 -
Ahy9g0461 812 Pfam Sey1 three-helix bundle domain 322 759 IPR046758 -
Ahy9g0461 812 MobiDBLite consensus disorder prediction 779 812 - -
Ahy9g0461 812 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 6 787 - -
Ahy9g0461 812 MobiDBLite consensus disorder prediction 757 812 - -
Ahy9g0461 812 CDD GBP 35 241 - -
Ahy9g0461 812 Hamap Protein SEY1 [SEY1]. 8 768 IPR008803 -
Ahy9g0461 812 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 36 251 IPR030386 GO:0005525
Ahy9g0461 812 MobiDBLite consensus disorder prediction 759 773 - -
Ahy9g0461 812 Gene3D - 16 244 IPR027417 -
Ahy9g0461 812 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 45 280 - -
Ahy9g0461 812 Coils Coil 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy9g0461 Ahy-Chr9 5859708 5873435 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy9g0461 K22698 - gmx:100780006 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0233 18 1862252 1868865 Ahy9g0461 9 5859708 5873435 PCT
Ahy8g1022 8 25012849 25019451 Ahy9g0461 9 5859708 5873435 PCT
Ahy9g0461 9 5859708 5873435 Ahy18g0233 18 1862252 1868865 PCT
Ahy9g0461 9 5859708 5873435 Ahy8g1022 8 25012849 25019451 PCT